BLASTX nr result

ID: Angelica23_contig00039151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039151
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593860.1| hypothetical protein MTR_2g018620 [Medicago ...    69   5e-10
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    63   3e-08
gb|ABO80475.1| probable reverse transcriptase At2g02650 - , rela...    60   2e-07
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    59   5e-07
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    58   7e-07

>ref|XP_003593860.1| hypothetical protein MTR_2g018620 [Medicago truncatula]
           gi|355482908|gb|AES64111.1| hypothetical protein
           MTR_2g018620 [Medicago truncatula]
          Length = 221

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
 Frame = -2

Query: 409 VRYILRSKGVPVTIVCPMCENDVVHVFHLFFDCEFASNCWQFMGLQF--DMATVESAP-S 239
           +R  L+ +G      CP+C+N V     L F C+F    W  + L       T+ S+P S
Sbjct: 1   MRKKLQERGANCPSSCPVCDNSVEQTIDLLFGCQFNKEVWDVVCLDVIEKRMTITSSPHS 60

Query: 238 *LLDKMTKEPHEVVIKIAAIIWGIWFARNNKVWEGKVLTPS---IAMSWSWKQIVDWRNA 68
            +L+  T E   +V K+A +IW +W  RNN +W  K  TPS     M  +     DWR A
Sbjct: 61  VILNSCTSEDSILVSKMAMVIWSLWCNRNNIIWNNKRSTPSQQVNVMGMANSLCEDWRLA 120

Query: 67  GQKNLVVPRSQTPTCTESR-QKW 2
                 +  +   +C+E+  Q W
Sbjct: 121 N----YISENSLDSCSENPIQSW 139


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
 Frame = -2

Query: 424  RNNLLVRYILRSKGVPVTIVCPMCENDVVHVFHLFFDCEFASNCWQFMGL----QFDMAT 257
            RN L  R  L+ +GV  T  C +CEN+     HLFF C  +  CWQ +GL    Q     
Sbjct: 1438 RNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQL 1497

Query: 256  VESAPS*LLDKMTKEPHEVVIKIAAIIWGIWFARNNKVWEGKVLTPSIAMSWSWKQIVDW 77
              S    + + + +      +  A ++W IW  RN+ +W  +V+T +         +  W
Sbjct: 1498 NLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGW 1557

Query: 76   RNA 68
            +NA
Sbjct: 1558 QNA 1560


>gb|ABO80475.1| probable reverse transcriptase At2g02650 - , related [Medicago
           truncatula]
          Length = 169

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
 Frame = -2

Query: 406 RYILRSKGVPVTIVCPMCENDVVHVFHLFFDCEFASNCWQFMGL----QFDMATVESAPS 239
           R  L+S+ V   ++CP C+  V   +H F  C  A   W + GL    Q  + TV S   
Sbjct: 60  RLRLQSRHVQCEVICPSCDTVVEDDWHAFVGCTVACESWYWAGLSIVRQSRVGTVSSLAD 119

Query: 238 *LLDKMTKEPHEVVIKIAAIIWGIWFARNNKVW 140
            + D    E  ++  ++A+++W IW ARN+ +W
Sbjct: 120 FVFDICRLESRDIAGRVASLLWKIWAARNDTIW 152


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/121 (24%), Positives = 51/121 (42%)
 Frame = -2

Query: 424 RNNLLVRYILRSKGVPVTIVCPMCENDVVHVFHLFFDCEFASNCWQFMGLQFDMATVESA 245
           RN L  R+ L  + V   + CP+C +++    H   +C  A + W   GL        S 
Sbjct: 529 RNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSF 588

Query: 244 PS*LLDKMTKEPHEVVIKIAAIIWGIWFARNNKVWEGKVLTPSIAMSWSWKQIVDWRNAG 65
              L          V  K  A+ WG+W+ RN+ VW G++      ++  +  +  W +A 
Sbjct: 589 VDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHAN 648

Query: 64  Q 62
           +
Sbjct: 649 E 649


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
 Frame = -2

Query: 424 RNNLLVRYILRSKGVPVTIVCPMCENDVVHVFHLFFDCEFASNCWQFMGLQFDMATV--- 254
           RN L  R  L+SKGV     C +C++      HLFF C  +   WQ +GL   +  V   
Sbjct: 387 RNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQRIGLWSPLMAVFDI 446

Query: 253 -ESAPS*LLDKMTKEPHEVVIKIAAIIWGIWFARNNKVWEGKVLTPSIAMSWSWKQIVDW 77
             S P+ +   +     +     +  +W IW  RNNKVW     T     + +   +  W
Sbjct: 447 NVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVWNNITDTAQDICARAGSLLTSW 506

Query: 76  RNAGQKNLVVPRSQTPTCTESRQKW 2
           RNA  +N+  P  Q P+ T +  KW
Sbjct: 507 RNA--QNIRHPSPQNPS-TPNDLKW 528


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