BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039121
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                       54   1e-05
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...    54   1e-05

>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
 Frame = +2

Query: 95  SRVQRVSEIAAIAGFHSH-VPLESHPSQHLETV--WFIKVLCTLCVRTSPSLQIFKSQYF 265
           SRV R S+IA IA FH H V +  +  + ++    W +KV+CTLCVRT  SL      YF
Sbjct: 43  SRV-RASKIA-IAQFHEHAVGISRNRPEVIQNPENWIVKVICTLCVRTH-SLDAC-LDYF 98

Query: 266 EKNLNPFLAFEVIKQVNFSFRNPKLAFGFFQFT 364
            K L P +AFEV++ +N    NP+LA  FFQ +
Sbjct: 99  SKTLTPSIAFEVVRGLN----NPELALKFFQLS 127


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
 Frame = +2

Query: 107 RVSEIAAIAGFHSHV-------PLESHPSQ--HLETVWFIKVLCTLCVRTSPSLQIFKSQ 259
           R +   AIA FH+H        PL+++  +  H    W +K++ TL V   P   +    
Sbjct: 3   RTTFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFC- 61

Query: 260 YFEKNLNPFLAFEVIKQVNFSFRNPKLAFGFFQFT 364
           Y  KNLNPF++FEV+K+++    NP + F F++F+
Sbjct: 62  YLSKNLNPFISFEVVKKLD---NNPHIGFRFWEFS 93


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42570711|ref|NP_973429.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
           [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330250896|gb|AEC05990.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330250897|gb|AEC05991.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
 Frame = +2

Query: 107 RVSEIAAIAGFHSHV-------PLESHPSQ--HLETVWFIKVLCTLCVRTSPSLQIFKSQ 259
           R +   AIA FH+H        PL+++  +  H    W +K++ TL V   P   +    
Sbjct: 3   RTTFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFC- 61

Query: 260 YFEKNLNPFLAFEVIKQVNFSFRNPKLAFGFFQFT 364
           Y  KNLNPF++FEV+K+++    NP + F F++F+
Sbjct: 62  YLSKNLNPFISFEVVKKLD---NNPHIGFRFWEFS 93