BLASTX nr result

ID: Angelica23_contig00039100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039100
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...   134   2e-29
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]         132   5e-29
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   125   6e-27
gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana] gi|...   123   3e-26
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             122   4e-26

>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score =  134 bits (336), Expect = 2e-29
 Identities = 71/164 (43%), Positives = 103/164 (62%)
 Frame = -1

Query: 587 KRARTEVTIGFDDSDLEGVKFPHDDPLVITPVIGNSEVKRVLIDNGASVDILFHDAFMKM 408
           KR + +  I F +S++  +  PHDD LVI   +GN E+  +++D G+SVD+LF+DAF + 
Sbjct: 39  KRQKPDDGITFWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRT 98

Query: 407 GYNDSQLTPSNTPIYGFNGVESKVEGTIQLPVTVGQKPIETTQMLNFLVINASSTYNAIL 228
           G+ DS+L    TP+ GF G  +   GTIQLP T+ +      Q+ NFLV++  + +NAIL
Sbjct: 99  GHLDSKLQGRKTPLTGFAGDTTFSIGTIQLP-TIAR---GVRQLTNFLVVDKKAPFNAIL 154

Query: 227 GRTGLHAFKAVASTYHMKIKFPTRNGVGEQKGDQKMARSCYVAA 96
           GR  LH  KAV STYH  IKFP+  G+    G Q+ +R CY+ +
Sbjct: 155 GRPWLHVMKAVPSTYHQCIKFPSYKGIAVVYGSQRSSRKCYMGS 198


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score =  132 bits (332), Expect = 5e-29
 Identities = 65/154 (42%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
 Frame = -1

Query: 524 PHDDPLVITPVIGNSEVKRVLIDNGASVDILFHDAFMKMGYNDSQLTPSNTPIYGFNGVE 345
           PHDDP++I   I  ++V RVLID G+SVD++F   F+ +G    Q+ P  TP+ GF+G  
Sbjct: 483 PHDDPIIIQATIHGAKVSRVLIDTGSSVDVMFLPTFLALGLKIEQIVPETTPLVGFDGST 542

Query: 344 SKVEGTIQLPVTVGQKPIETTQMLNFLVINA-SSTYNAILGRTGLHAFKAVASTYHMKIK 168
           S+  G+I L ++ G+  +  T+ + F +INA + TYN I GR  L  F+AV S  H+K+K
Sbjct: 543 SETLGSIPLLMSWGRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVK 602

Query: 167 FPTRNGVGEQKGDQKMARSCYVAALRPDGVGGQV 66
           FP  NG+GE KG+Q  AR C +  +     GG +
Sbjct: 603 FPANNGIGEVKGNQARARECRLNTMAAIEEGGDI 636


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  125 bits (314), Expect = 6e-27
 Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 11/178 (6%)
 Frame = -1

Query: 545  DLEGVKFPHDDPLVITPVIGNSEVKRVLIDNGASVDILFHDAFMKMGYNDSQLTPSNTPI 366
            D EG+ + H+D LVI  ++   E++R+L+D G+SVDILF  A   MG +D +L  +NT +
Sbjct: 540  DEEGILYLHEDALVIKAMVAAIELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSL 599

Query: 365  YGFNGVESKVEGTIQLPVTVGQKPIETTQMLNFLVINASSTYNAILGRTGLHAFKAVAST 186
             GF G      G  +LP+TVG KP E   ML F+V+   S Y  ILGR  +   + V ST
Sbjct: 600  KGFGGGRLTPMGINELPITVGSKPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVIST 659

Query: 185  YHMKIKFPTRNGVGEQKGDQKMARSCYVAAL-----------RPDGVGGQVLPIEDMD 45
            +++ +K+     VG  KG QKM RSCY  A            R D   G+  P+E +D
Sbjct: 660  HYLALKYRVNGVVGVVKGVQKMTRSCYATAAKETLQVTSLDNRGDSKKGRQEPVEKLD 717


>gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana]
           gi|7267161|emb|CAB77873.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 681

 Score =  123 bits (308), Expect = 3e-26
 Identities = 66/139 (47%), Positives = 91/139 (65%)
 Frame = -1

Query: 563 IGFDDSDLEGVKFPHDDPLVITPVIGNSEVKRVLIDNGASVDILFHDAFMKMGYNDSQLT 384
           I F +S+   +  PHDD LVI   +GN E+  ++ID G+SVD+LF+DAF +MG+ DS+L 
Sbjct: 521 ITFWESETTDLNKPHDDALVIRIDVGNYELSHIMIDTGSSVDVLFYDAFKRMGHLDSELQ 580

Query: 383 PSNTPIYGFNGVESKVEGTIQLPVTVGQKPIETTQMLNFLVINASSTYNAILGRTGLHAF 204
              TP+ GF G  +   GTIQLP T+ +      ++ +FLV+N  + +NAILGR  LHA 
Sbjct: 581 GRKTPLTGFAGDTTFSLGTIQLP-TIAR---GVRRLTSFLVVNKKAPFNAILGRPWLHAM 636

Query: 203 KAVASTYHMKIKFPTRNGV 147
           KAV STYH  IKFP+  G+
Sbjct: 637 KAVPSTYHQCIKFPSDKGI 655


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  122 bits (307), Expect = 4e-26
 Identities = 62/139 (44%), Positives = 84/139 (60%)
 Frame = -1

Query: 563  IGFDDSDLEGVKFPHDDPLVITPVIGNSEVKRVLIDNGASVDILFHDAFMKMGYNDSQLT 384
            I F D DLEG+  PH+DPLV+  +I +S V RVLID G+SVD++F D    M   D Q+ 
Sbjct: 600  ISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIK 659

Query: 383  PSNTPIYGFNGVESKVEGTIQLPVTVGQKPIETTQMLNFLVINASSTYNAILGRTGLHAF 204
            P + P+ GF+G      GTI+LP+ VG         + F+VI   + YN ILG   +H  
Sbjct: 660  PVSKPLAGFDGDFVMTIGTIKLPIFVG----GLIAWVKFVVIGKPAVYNVILGTPWIHQM 715

Query: 203  KAVASTYHMKIKFPTRNGV 147
            +A+ STYH  +KFPT NG+
Sbjct: 716  QAIPSTYHQCVKFPTHNGI 734


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