BLASTX nr result

ID: Angelica23_contig00039096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039096
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   108   2e-21
emb|CBI32533.3| unnamed protein product [Vitis vinifera]              100   5e-19
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   100   5e-19
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   100   5e-19
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...    97   7e-18

>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  108 bits (271), Expect = 2e-21
 Identities = 50/78 (64%), Positives = 63/78 (80%)
 Frame = +2

Query: 2   EYLRIAVKKHDIVPKGTSYEFVIKGLCQEGRMEDGLKLQAEMVGKGHEPNSEIYNAFIDG 181
           E++R AV K D++P   SYE +IKGLC +GRME+ LK+QAEMVGKG +PNSEIY AF+DG
Sbjct: 404 EFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAFVDG 463

Query: 182 YMKQGNEEQARKLRKEMV 235
           Y++ GNEE A  LRKEM+
Sbjct: 464 YVRHGNEEMAEALRKEML 481


>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  100 bits (250), Expect = 5e-19
 Identities = 47/75 (62%), Positives = 59/75 (78%)
 Frame = +2

Query: 8   LRIAVKKHDIVPKGTSYEFVIKGLCQEGRMEDGLKLQAEMVGKGHEPNSEIYNAFIDGYM 187
           LR+A+   +  P+G SYE +IKG C+EG+ME+  KLQ+EMVGKG +P  EIY+AFIDGYM
Sbjct: 215 LRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYM 274

Query: 188 KQGNEEQARKLRKEM 232
           KQGN+E A  LRKEM
Sbjct: 275 KQGNKEIAETLRKEM 289


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  100 bits (250), Expect = 5e-19
 Identities = 47/75 (62%), Positives = 59/75 (78%)
 Frame = +2

Query: 8   LRIAVKKHDIVPKGTSYEFVIKGLCQEGRMEDGLKLQAEMVGKGHEPNSEIYNAFIDGYM 187
           LR+A+   +  P+G SYE +IKG C+EG+ME+  KLQ+EMVGKG +P  EIY+AFIDGYM
Sbjct: 408 LRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYM 467

Query: 188 KQGNEEQARKLRKEM 232
           KQGN+E A  LRKEM
Sbjct: 468 KQGNKEIAETLRKEM 482


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  100 bits (250), Expect = 5e-19
 Identities = 49/77 (63%), Positives = 58/77 (75%)
 Frame = +2

Query: 2   EYLRIAVKKHDIVPKGTSYEFVIKGLCQEGRMEDGLKLQAEMVGKGHEPNSEIYNAFIDG 181
           E +RIA++       G SYE +IKGLC++G+M++ LKLQAEMVG G EPN EIY AFIDG
Sbjct: 400 EIMRIAMRNDGFRLSGKSYELLIKGLCKDGKMDEALKLQAEMVGGGFEPNFEIYGAFIDG 459

Query: 182 YMKQGNEEQARKLRKEM 232
           YMK GNEE A  LRKEM
Sbjct: 460 YMKLGNEEMAAMLRKEM 476


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = +2

Query: 8   LRIAVKKHDIVPKGTSYEFVIKGLCQEGRMEDGLKLQAEMVGKGHEPNSEIYNAFIDGYM 187
           +R A++     P G SYE +I GLC++G+ME+ LKLQ+EMVGKG +PNS IY AFI+GY+
Sbjct: 410 MRSAMRDVSFHPNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYV 469

Query: 188 KQGNEEQARKLRKEM 232
           K GNEE A  LRKEM
Sbjct: 470 KLGNEEMAAMLRKEM 484


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