BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00039090
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   200   2e-49
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   189   5e-46
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g...   179   3e-43
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...   179   3e-43
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops...   178   6e-43

>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  200 bits (509), Expect = 2e-49
 Identities = 102/167 (61%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
 Frame = -1

Query: 632 PQPPFDIHLPDVKDQIISITNPGTFSANEVKVACCTVDIIKQLSGEEISRNAA-GGSKHR 456
           PQP F IH PD+K QI S+TNPG F ANEVKV CCTVD+IKQLSGE ISRN   G S+ R
Sbjct: 457 PQPAFSIHPPDLKHQITSLTNPGMFDANEVKVGCCTVDVIKQLSGEMISRNPTDGSSRDR 516

Query: 455 MSTLANHVLCQRSFYPLYPPAEGIPLDFSLAPEALEXXXXXXXXXXXXXLTHFXXXXXXX 276
           M+T+ANH+L QRSFYPLYP AEGIPLDFSLAPEALE             L  F       
Sbjct: 517 MTTIANHILSQRSFYPLYPLAEGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLG 576

Query: 275 XXXXXXVQRNCLCINPGRLARGEGGGFFVELNYHGSPDSATVSIIRI 135
                     C+C+NPGRLA+GEGGG FVELNY GSPD  + S+IRI
Sbjct: 577 GRNEGEELVKCICVNPGRLAKGEGGGHFVELNYQGSPDKTSASVIRI 623


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  189 bits (479), Expect = 5e-46
 Identities = 95/167 (56%), Positives = 111/167 (66%), Gaps = 1/167 (0%)
 Frame = -1

Query: 632 PQPPFDIHLPDVKDQIISITNPGTFSANEVKVACCTVDIIKQLSGEEISRNAAGGS-KHR 456
           PQP FDIH  +++ QI S+TNPG F AN+V+V CCTVDIIKQL  EE+SRN   G+  +R
Sbjct: 455 PQPAFDIHRSNLQHQIRSLTNPGIFEANQVRVGCCTVDIIKQLGSEEMSRNPTDGTPSNR 514

Query: 455 MSTLANHVLCQRSFYPLYPPAEGIPLDFSLAPEALEXXXXXXXXXXXXXLTHFXXXXXXX 276
           MS LANH+L QRSFYPLYPPAE +PLDFSLAPEAL              + +F       
Sbjct: 515 MSRLANHILSQRSFYPLYPPAEDVPLDFSLAPEALHIPSVPHILIVPSDMKYFIKVLSLG 574

Query: 275 XXXXXXVQRNCLCINPGRLARGEGGGFFVELNYHGSPDSATVSIIRI 135
                  Q  C+CINPGRLA+GEGGG FVELNY GSPD    S+I I
Sbjct: 575 GRIEGEEQTKCVCINPGRLAKGEGGGTFVELNYRGSPDKMNASVIGI 621


>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
           gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
           [Arabidopsis thaliana]
          Length = 620

 Score =  179 bits (455), Expect = 3e-43
 Identities = 88/166 (53%), Positives = 112/166 (67%)
 Frame = -1

Query: 632 PQPPFDIHLPDVKDQIISITNPGTFSANEVKVACCTVDIIKQLSGEEISRNAAGGSKHRM 453
           PQPPFDIH+PD++ Q+ S++NPGTF AN+VKV+CCTVD++KQLSGEE+S+N +G    RM
Sbjct: 458 PQPPFDIHIPDLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRM 517

Query: 452 STLANHVLCQRSFYPLYPPAEGIPLDFSLAPEALEXXXXXXXXXXXXXLTHFXXXXXXXX 273
           S LA+H+L QRSFYPLYPP E +P D SLAP+AL+             + +F        
Sbjct: 518 SRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYF---VKILS 574

Query: 272 XXXXXVQRNCLCINPGRLARGEGGGFFVELNYHGSPDSATVSIIRI 135
                    C+C+NPGRLA+GEG G FVEL Y G P+S   SII I
Sbjct: 575 LGEEEDAAKCVCVNPGRLAKGEGAGTFVELTYKGGPESMHASIISI 620


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
           lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
           subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  179 bits (455), Expect = 3e-43
 Identities = 88/166 (53%), Positives = 111/166 (66%)
 Frame = -1

Query: 632 PQPPFDIHLPDVKDQIISITNPGTFSANEVKVACCTVDIIKQLSGEEISRNAAGGSKHRM 453
           PQPPFDIH+PD++ Q+ S++NPGTF AN+VKV CCTVD++KQLSGEE+S+N +G    RM
Sbjct: 457 PQPPFDIHIPDLEHQMTSLSNPGTFEANQVKVGCCTVDVLKQLSGEEMSKNPSGVPTDRM 516

Query: 452 STLANHVLCQRSFYPLYPPAEGIPLDFSLAPEALEXXXXXXXXXXXXXLTHFXXXXXXXX 273
           S LA+H+L QRSFYPLYPP E +P D SLAP+AL+             + +F        
Sbjct: 517 SRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQILSIPDILLLPSDMRYF---VKILS 573

Query: 272 XXXXXVQRNCLCINPGRLARGEGGGFFVELNYHGSPDSATVSIIRI 135
                    C+C+NPGRLA+GEG G FVEL Y G P+S   SII I
Sbjct: 574 LGEEENAAKCVCVNPGRLAKGEGAGTFVELTYKGGPESMRASIISI 619


>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
           gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
           thaliana]
          Length = 620

 Score =  178 bits (452), Expect = 6e-43
 Identities = 87/166 (52%), Positives = 112/166 (67%)
 Frame = -1

Query: 632 PQPPFDIHLPDVKDQIISITNPGTFSANEVKVACCTVDIIKQLSGEEISRNAAGGSKHRM 453
           PQPPFDIH+PD++ Q+ S++NPGTF AN+VKV+CCTVD++KQLSGEE+S+N +G    RM
Sbjct: 458 PQPPFDIHIPDLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRM 517

Query: 452 STLANHVLCQRSFYPLYPPAEGIPLDFSLAPEALEXXXXXXXXXXXXXLTHFXXXXXXXX 273
           S LA+H+L QRSFYPLYPP E +P D SLAP+AL+             + +F        
Sbjct: 518 SRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYF---VKILS 574

Query: 272 XXXXXVQRNCLCINPGRLARGEGGGFFVELNYHGSPDSATVSIIRI 135
                    C+C+NPGRLA+GEG G +VEL Y G P+S   SII I
Sbjct: 575 LGEEEDAAKCVCVNPGRLAKGEGAGTYVELTYKGGPESMHASIISI 620