BLASTX nr result

ID: Angelica23_contig00038457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038457
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containi...   125   1e-26
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]   120   4e-25
ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containi...   107   4e-21
ref|XP_004143835.1| PREDICTED: pentatricopeptide repeat-containi...   107   4e-21
ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   105   2e-20

>ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  125 bits (313), Expect = 1e-26
 Identities = 66/134 (49%), Positives = 90/134 (67%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DGLCK+G I+ AIK FL K+  + +G+  +E+D   C  N V YTALIQGLC DG+I++A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
           SK FSDMR   LRPDV +   I +GH +   + +VM+L+AD+LK GII +  V  +L   
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635

Query: 363 HQEVGDLTSAPRCT 404
           ++E G L SA RC+
Sbjct: 636 YEESGYLKSALRCS 649



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 38/130 (29%), Positives = 65/130 (50%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DG C+ G   KA + F             DEM        VV YT LI+GLC + +I EA
Sbjct: 201 DGCCRQGDFLKAFRLF-------------DEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
             +F  MR+  + P++ +Y T+  G+ ++  +   + L  +ML  G++ +V+  G+L + 
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG 307

Query: 363 HQEVGDLTSA 392
             +  ++ SA
Sbjct: 308 LCKTDEMVSA 317



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/104 (28%), Positives = 54/104 (51%)
 Frame = +3

Query: 87  IDEMDNVSCLANVVTYTALIQGLCRDGQIYEASKLFSDMRSLDLRPDVLSYYTITKGHLQ 266
           + EM     L N VTY  LI G C++G + +A ++ S M    + P+++++ T+  G+ +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 267 VKDMLNVMVLRADMLKSGIISDVLVCGMLTNIHQEVGDLTSAPR 398
              M   M L  +M+  G++ DV+    L + H + G+   A R
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  120 bits (301), Expect = 4e-25
 Identities = 64/130 (49%), Positives = 87/130 (66%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DGLCK+G I+ AIK FL K+  + +G+  +E+D   C  N V YTALIQGLC DG+I++A
Sbjct: 516 DGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKA 575

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
           SK FSDMR   LRPDV +   I +GH +   + +VM+L+AD+LK GII +  V  +L   
Sbjct: 576 SKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKG 635

Query: 363 HQEVGDLTSA 392
           ++E G L SA
Sbjct: 636 YEESGYLKSA 645



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 38/130 (29%), Positives = 65/130 (50%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DG C+ G   KA + F             DEM        VV YT LI+GLC + +I EA
Sbjct: 201 DGCCRQGDFLKAFRLF-------------DEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
             +F  MR+  + P++ +Y T+  G+ ++  +   + L  +ML  G++ +V+  G+L + 
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDG 307

Query: 363 HQEVGDLTSA 392
             +  ++ SA
Sbjct: 308 LCKTDEMVSA 317



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/104 (28%), Positives = 54/104 (51%)
 Frame = +3

Query: 87  IDEMDNVSCLANVVTYTALIQGLCRDGQIYEASKLFSDMRSLDLRPDVLSYYTITKGHLQ 266
           + EM     L N VTY  LI G C++G + +A ++ S M    + P+++++ T+  G+ +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 267 VKDMLNVMVLRADMLKSGIISDVLVCGMLTNIHQEVGDLTSAPR 398
              M   M L  +M+  G++ DV+    L + H + G+   A R
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494


>ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  107 bits (266), Expect = 4e-21
 Identities = 61/134 (45%), Positives = 82/134 (61%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DGLCK+G I+ A++ F  K  F+    ++D   +   L N V YTALI GLC+DGQ  +A
Sbjct: 505 DGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKA 564

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
            KLFSDMR   L+PD + Y  + +G  QVK +L  M+L ADMLK G+I +  V  +L   
Sbjct: 565 VKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYIL--MMLHADMLKFGVIPNSAVHVILCEC 622

Query: 363 HQEVGDLTSAPRCT 404
           +QE G L SA  C+
Sbjct: 623 YQESGFLKSAQNCS 636



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 39/130 (30%), Positives = 67/130 (51%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DG C+ G + +A + F             DEM     +  V+ YT LI+GLC D +I EA
Sbjct: 190 DGCCRQGDLLRAQEMF-------------DEMRVKGIVPTVIVYTILIRGLCSDNKIEEA 236

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
             +   MR + + P+V +Y T+  G+ ++ +    + L  DML  G++ DV+  G+L + 
Sbjct: 237 ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDG 296

Query: 363 HQEVGDLTSA 392
             + G++ +A
Sbjct: 297 LCKFGEMKAA 306



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 22/152 (14%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELS----------------------GTSIDEMDNVSCL 116
           D  CK G +++A+  FL    FE+S                      G   ++M     L
Sbjct: 330 DAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGIL 389

Query: 117 ANVVTYTALIQGLCRDGQIYEASKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVL 296
           AN VTY +LI G C++G++ +A ++ S M    + P+V+++ T+  G+ +++++   M +
Sbjct: 390 ANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGI 449

Query: 297 RADMLKSGIISDVLVCGMLTNIHQEVGDLTSA 392
            ++M+   +  DV+    + + H + G +  A
Sbjct: 450 YSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEA 481


>ref|XP_004143835.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 362

 Score =  107 bits (266), Expect = 4e-21
 Identities = 61/134 (45%), Positives = 82/134 (61%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DGLCK+G I+ A++ F  K  F+    ++D   +   L N V YTALI GLC+DGQ  +A
Sbjct: 222 DGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKA 281

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
            KLFSDMR   L+PD + Y  + +G  QVK +L  M+L ADMLK G+I +  V  +L   
Sbjct: 282 VKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYIL--MMLHADMLKFGVIPNSAVHVILCEC 339

Query: 363 HQEVGDLTSAPRCT 404
           +QE G L SA  C+
Sbjct: 340 YQESGFLKSAQNCS 353


>ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  105 bits (261), Expect = 2e-20
 Identities = 56/134 (41%), Positives = 83/134 (61%)
 Frame = +3

Query: 3   DGLCKNGMITKAIKCFLNKSIFELSGTSIDEMDNVSCLANVVTYTALIQGLCRDGQIYEA 182
           DGL K+G    AIK FL K+     G   D+MD+  C  N + Y  LIQGLC DG I++A
Sbjct: 353 DGLLKDGRTNDAIKMFLEKTGAGYPG---DKMDSRFCSPNSMMYAILIQGLCEDGXIFKA 409

Query: 183 SKLFSDMRSLDLRPDVLSYYTITKGHLQVKDMLNVMVLRADMLKSGIISDVLVCGMLTNI 362
           +K F++M+    +PD+L Y T+ + H Q K M++VM+L ADM+K G+I +  +  +L+  
Sbjct: 410 TKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRG 469

Query: 363 HQEVGDLTSAPRCT 404
           ++E G L SA  C+
Sbjct: 470 YRENGYLKSALMCS 483


Top