BLASTX nr result

ID: Angelica23_contig00038454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038454
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795...    94   2e-17
emb|CBI32274.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263...    91   1e-16
ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790...    89   4e-16
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati...    87   1e-15

>ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
          Length = 206

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/88 (55%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
 Frame = -2

Query: 382 KHKANVRDYYMQFEAQQNQILVDQRIKAHLGQTAVFQQVGGVYNQ---XXXXXXXXXXXX 212
           KHKANVR YY QFE QQ Q L+DQRIK HLGQ A FQQVG  YN                
Sbjct: 29  KHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPP 88

Query: 211 XXXMQGNMQFPGSAPFVPGMRPPVMYRP 128
              + GN Q PGS P +PGMRPPV  RP
Sbjct: 89  RLPIPGNAQIPGSQPLMPGMRPPVFPRP 116


>emb|CBI32274.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/93 (51%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
 Frame = -2

Query: 382 KHKANVRDYYMQFEAQQNQILVDQRIKAHLGQTAVFQQVGGVYNQ--------XXXXXXX 227
           KHKANVR YY QFE QQ Q L+DQRIK HLGQTA FQQVG  YNQ               
Sbjct: 29  KHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLVSFPGNPPRPRLP 88

Query: 226 XXXXXXXXMQGNMQFPGSAPFVPGMRPPVMYRP 128
                   + G+   P ++P VPGMRPPV+ RP
Sbjct: 89  VLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPRP 121


>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
           gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
           small nuclear ribonucleoprotein C; Short=U1 snRNP C;
           Short=U1-C; Short=U1C
          Length = 213

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/93 (51%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
 Frame = -2

Query: 382 KHKANVRDYYMQFEAQQNQILVDQRIKAHLGQTAVFQQVGGVYNQ--------XXXXXXX 227
           KHKANVR YY QFE QQ Q L+DQRIK HLGQTA FQQVG  YNQ               
Sbjct: 29  KHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQTAAFQQVGAAYNQHLVSFPGNPPRPRLP 88

Query: 226 XXXXXXXXMQGNMQFPGSAPFVPGMRPPVMYRP 128
                   + G+   P ++P VPGMRPPV+ RP
Sbjct: 89  VLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPRP 121


>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
          Length = 206

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/88 (53%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -2

Query: 382 KHKANVRDYYMQFEAQQNQILVDQRIKAHLGQTAVFQQVGGVYNQ---XXXXXXXXXXXX 212
           KHKANVR YY QFE QQ Q L+DQRIK HLGQ A FQQVG  YN                
Sbjct: 29  KHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPP 88

Query: 211 XXXMQGNMQFPGSAPFVPGMRPPVMYRP 128
              + GN Q PG  P + GMRPPV  RP
Sbjct: 89  RLPIPGNAQIPGGQPLMQGMRPPVFPRP 116


>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
           gi|223540083|gb|EEF41660.1| U1 small nuclear
           ribonucleoprotein C, putative [Ricinus communis]
          Length = 206

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/88 (52%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
 Frame = -2

Query: 382 KHKANVRDYYMQFEAQQNQILVDQRIKAHLGQTAVFQQVGGVYNQ--XXXXXXXXXXXXX 209
           KHKANVR YY QFE QQ Q L+DQRIK HLGQ A FQQVG  YNQ               
Sbjct: 29  KHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLQRPRLPVLPTPM 88

Query: 208 XXMQGNMQFPGSAPFVPGMR-PPVMYRP 128
             + G+ Q P + P +PG+R PPV+ RP
Sbjct: 89  MPIPGSAQLPANTPLMPGIRPPPVLPRP 116


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