BLASTX nr result

ID: Angelica23_contig00038342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038342
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...    98   5e-23
ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group] g...    99   5e-23
gb|AAX95862.1| retrotransposon protein, putative, unclassified [...    99   6e-23
ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827...    99   7e-23
gb|ABA95339.2| retrotransposon protein, putative, unclassified [...    97   9e-23

>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score = 98.2 bits (243), Expect(2) = 5e-23
 Identities = 44/87 (50%), Positives = 61/87 (70%)
 Frame = -2

Query: 315  ESLPKLSGYDTIMVVIDKYTK*CRLIPLQHPFTATQVTQQFLGQVFKLYGPPKVHISDRD 136
            E LP+ S Y+ I+VV+DK++K    IPL HPF A  V Q+F+  ++KL+G P+  ISDRD
Sbjct: 1201 EGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRD 1260

Query: 135  KIFTSHFWSELFTALVSTSHHTTAYHP 55
            KIFTS FW +LF+   +  H ++AYHP
Sbjct: 1261 KIFTSQFWDQLFSKFGTDLHMSSAYHP 1287



 Score = 34.3 bits (77), Expect(2) = 5e-23
 Identities = 13/18 (72%), Positives = 18/18 (100%)
 Frame = -3

Query: 56   RSDGQSERLNQCVEMYLR 3
            +SDGQ+ER+NQC+E+YLR
Sbjct: 1288 QSDGQTERVNQCLEIYLR 1305


>ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group]
           gi|113644753|dbj|BAF27894.1| Os11g0224300, partial
           [Oryza sativa Japonica Group]
          Length = 383

 Score = 99.0 bits (245), Expect(2) = 5e-23
 Identities = 46/87 (52%), Positives = 60/87 (68%)
 Frame = -2

Query: 315 ESLPKLSGYDTIMVVIDKYTK*CRLIPLQHPFTATQVTQQFLGQVFKLYGPPKVHISDRD 136
           E LPK  GYDTI+VV+DK++K  + IPL HPFTA QV   F+  V+ ++G P+V ISDRD
Sbjct: 56  EGLPKSEGYDTILVVVDKFSKFAKFIPLSHPFTALQVATAFIKNVYDIFGMPQVIISDRD 115

Query: 135 KIFTSHFWSELFTALVSTSHHTTAYHP 55
           KIFTS  W ELF       + +++YHP
Sbjct: 116 KIFTSALWQELFKLADVKLNMSSSYHP 142



 Score = 33.5 bits (75), Expect(2) = 5e-23
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 56  RSDGQSERLNQCVEMYLR 3
           ++DGQ+ERLNQC+E YLR
Sbjct: 143 QTDGQTERLNQCLEAYLR 160


>gb|AAX95862.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77549399|gb|ABA92196.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 332

 Score = 99.0 bits (245), Expect(2) = 6e-23
 Identities = 46/87 (52%), Positives = 60/87 (68%)
 Frame = -2

Query: 315 ESLPKLSGYDTIMVVIDKYTK*CRLIPLQHPFTATQVTQQFLGQVFKLYGPPKVHISDRD 136
           E LPK  GYDTI+VV+DK++K  + IPL HPFTA QV   F+  V+ ++G P+V ISDRD
Sbjct: 5   EGLPKSEGYDTILVVVDKFSKFAKFIPLSHPFTALQVATAFIKNVYDIFGMPQVIISDRD 64

Query: 135 KIFTSHFWSELFTALVSTSHHTTAYHP 55
           KIFTS  W ELF       + +++YHP
Sbjct: 65  KIFTSALWQELFKLADVKLNMSSSYHP 91



 Score = 33.5 bits (75), Expect(2) = 6e-23
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 56  RSDGQSERLNQCVEMYLR 3
           ++DGQ+ERLNQC+E YLR
Sbjct: 92  QTDGQTERLNQCLEAYLR 109


>ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
            distachyon]
          Length = 1665

 Score = 98.6 bits (244), Expect(2) = 7e-23
 Identities = 46/87 (52%), Positives = 62/87 (71%)
 Frame = -2

Query: 315  ESLPKLSGYDTIMVVIDKYTK*CRLIPLQHPFTATQVTQQFLGQVFKLYGPPKVHISDRD 136
            E LP  + +DTI+VVIDK+TK    IPL+HPFTA  V Q FL  V++L+G PK+ ISDRD
Sbjct: 1305 EGLPSSNHFDTILVVIDKFTKYGHFIPLKHPFTAATVAQLFLDNVYRLHGLPKIIISDRD 1364

Query: 135  KIFTSHFWSELFTALVSTSHHTTAYHP 55
            K+F S FW +LF    +T + +++YHP
Sbjct: 1365 KVFISSFWQQLFKLADTTLNLSSSYHP 1391



 Score = 33.5 bits (75), Expect(2) = 7e-23
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 56   RSDGQSERLNQCVEMYLR 3
            ++DGQ+ERLNQC+E YLR
Sbjct: 1392 QTDGQTERLNQCLETYLR 1409


>gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1348

 Score = 97.4 bits (241), Expect(2) = 9e-23
 Identities = 44/87 (50%), Positives = 59/87 (67%)
 Frame = -2

Query: 315  ESLPKLSGYDTIMVVIDKYTK*CRLIPLQHPFTATQVTQQFLGQVFKLYGPPKVHISDRD 136
            E LPK   Y+ I+VV+DK++K    +PL HPFTA  V   F+  ++KL+G P+V +SDRD
Sbjct: 967  EGLPKSERYNCILVVVDKFSKYAHFVPLTHPFTAETVATAFMKNIYKLHGMPRVIVSDRD 1026

Query: 135  KIFTSHFWSELFTALVSTSHHTTAYHP 55
            KIFTS FW  LFT   +  H ++AYHP
Sbjct: 1027 KIFTSQFWEYLFTKSGTELHMSSAYHP 1053



 Score = 34.3 bits (77), Expect(2) = 9e-23
 Identities = 13/18 (72%), Positives = 18/18 (100%)
 Frame = -3

Query: 56   RSDGQSERLNQCVEMYLR 3
            +SDGQ+ER+NQCVE++LR
Sbjct: 1054 QSDGQTERVNQCVELFLR 1071


Top