BLASTX nr result

ID: Angelica23_contig00038329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038329
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...   242   4e-62
ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...   237   1e-60
emb|CBI24843.3| unnamed protein product [Vitis vinifera]              236   2e-60
ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|2...   214   9e-54
ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arab...   207   1e-51

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score =  242 bits (617), Expect = 4e-62
 Identities = 115/184 (62%), Positives = 150/184 (81%), Gaps = 5/184 (2%)
 Frame = -2

Query: 548 MFYSNSFLARRGPLGTVWCAAHLQNRLKKSHITATNIPKTVERIMFPELPIALRMSGHLL 369
           MFYS++FLAR+GPLGTVWCAAHLQ++LKKSH TAT+IP TVERIMFPE+PIALRMSGHLL
Sbjct: 1   MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLL 60

Query: 368 LGVVRIYSKQVDYFCQDCKVLLFGVKKAYTSTNVNLPENATHATLESITLPDNFQLDVMD 189
           LGVVRIYSK+VDY  QDC ++L G++KA++S  VNLPE+A+HA   SITLPD F+LD +D
Sbjct: 61  LGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSIEVNLPEDASHAPFHSITLPDTFELDALD 120

Query: 188 IDDNLESERFHDNHMRSREDITIEDQIPIGQDPYIVVSFNEDVVSNSPF-----ETGYQQ 24
           +D +   E   D H+R++E+IT+ DQIPIG+DPYI ++F+EDV+++        ++G + 
Sbjct: 121 LDADFYVEGALDMHLRAQEEITLTDQIPIGRDPYIAITFDEDVMTDLSNHEEIPDSGVRP 180

Query: 23  MHED 12
           M ED
Sbjct: 181 MDED 184


>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score =  237 bits (604), Expect = 1e-60
 Identities = 110/167 (65%), Positives = 141/167 (84%)
 Frame = -2

Query: 548 MFYSNSFLARRGPLGTVWCAAHLQNRLKKSHITATNIPKTVERIMFPELPIALRMSGHLL 369
           MFYS +FLAR+GPLGTVWCAAHLQ+RLKKSH T+T+I  TV+RIMFPE+PIALRMSGHLL
Sbjct: 1   MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDISSTVDRIMFPEVPIALRMSGHLL 60

Query: 368 LGVVRIYSKQVDYFCQDCKVLLFGVKKAYTSTNVNLPENATHATLESITLPDNFQLDVMD 189
           LGVVRIYSK+VD+   DC V+L G++KA+TS  VNLPENAT A  ES+TLP  F LD +D
Sbjct: 61  LGVVRIYSKKVDFLYHDCNVVLVGLRKAFTSIEVNLPENATTAKFESVTLPPTFDLDALD 120

Query: 188 IDDNLESERFHDNHMRSREDITIEDQIPIGQDPYIVVSFNEDVVSNS 48
           +D ++++    DNHMRS+E+IT++DQIP  +DPY+V+SF+EDV+ ++
Sbjct: 121 VDFDIDAYGSPDNHMRSQEEITLQDQIPTDRDPYVVISFDEDVMMDT 167


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  236 bits (603), Expect = 2e-60
 Identities = 109/161 (67%), Positives = 138/161 (85%)
 Frame = -2

Query: 548 MFYSNSFLARRGPLGTVWCAAHLQNRLKKSHITATNIPKTVERIMFPELPIALRMSGHLL 369
           MFYS++FLAR+GPLGTVWCAAHLQ++LKKSH TAT+IP TVERIMFPE+PIALRMSGHLL
Sbjct: 1   MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLL 60

Query: 368 LGVVRIYSKQVDYFCQDCKVLLFGVKKAYTSTNVNLPENATHATLESITLPDNFQLDVMD 189
           LGVVRIYSK+VDY  QDC ++L G++KA++S  VNLPE+A+HA   SITLPD F+LD +D
Sbjct: 61  LGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSIEVNLPEDASHAPFHSITLPDTFELDALD 120

Query: 188 IDDNLESERFHDNHMRSREDITIEDQIPIGQDPYIVVSFNE 66
           +D +   E   D H+R++E+IT+ DQIPIG+DPYI ++F+E
Sbjct: 121 LDADFYVEGALDMHLRAQEEITLTDQIPIGRDPYIAITFDE 161


>ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|222846910|gb|EEE84457.1|
           predicted protein [Populus trichocarpa]
          Length = 818

 Score =  214 bits (545), Expect = 9e-54
 Identities = 110/171 (64%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
 Frame = -2

Query: 548 MFYSNSFLARRGPLGTVWCAAHLQNRLKKSHITATNIPKTVERIMFPELPIALRMSGHLL 369
           MFYS +FLAR+GPLGTVWCAAHLQ+RLKKSH T+T+IP TV+RIMFPE+PIALRMS HLL
Sbjct: 1   MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDIPSTVDRIMFPEVPIALRMSSHLL 60

Query: 368 LGVVRIYSKQVDYFCQDCKVLLFGVKKAYTSTNVNLPENATHATLESITLPDNFQLDVMD 189
           LGVVRIY K+VDY  QDC V L G+ KA+T+T VNLPENAT AT ESITLP    LD  D
Sbjct: 61  LGVVRIYKKKVDYLFQDCTVALAGLNKAFTTTEVNLPENATTATFESITLPPTLNLDGFD 120

Query: 188 IDDNLESERF----HDNHMRSREDITIEDQIPIGQDPYIVVSFNEDVVSNS 48
           + D L+ E F     DNH++S E+ITI DQI     PYI +  +ED +  S
Sbjct: 121 MSDYLDPEGFVVRSPDNHLKSYEEITIPDQI----SPYITIHVDEDNICPS 167


>ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arabidopsis lyrata subsp.
           lyrata] gi|297322348|gb|EFH52769.1| hypothetical protein
           ARALYDRAFT_486422 [Arabidopsis lyrata subsp. lyrata]
          Length = 696

 Score =  207 bits (526), Expect = 1e-51
 Identities = 104/168 (61%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
 Frame = -2

Query: 548 MFYSNSFLARRGPLGTVWCAAHLQNRLKKSHITATNIPKTVERIMFPELPIALRMSGHLL 369
           MFYS++ LAR+GPLGTVWCAAH+Q+RLKKS  TA NIP TV+ IMFPE P+ALR+SGHLL
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVQHRLKKSQYTAVNIPDTVDNIMFPEAPLALRLSGHLL 60

Query: 368 LGVVRIYSKQVDYFCQDCKVLLFGVKKAYTSTNVNLPENATHATLESITLPDNFQLDVMD 189
            GVVRIYSK+VDY   D  +L   V KA+ S+ VNLPE+A  A  ES+TLP    LD  D
Sbjct: 61  FGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSSQVNLPEDARQAPPESVTLPQALNLDEFD 120

Query: 188 I-DDNLESERFHDNHMRSREDITIEDQIPIGQDPYIVVSFNEDVVSNS 48
           + DD L+ E   DNH RS EDIT+ DQIP G DPY+ V+F+ED++S S
Sbjct: 121 LEDDRLDME--FDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISES 166


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