BLASTX nr result

ID: Angelica23_contig00038316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038316
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...   135   3e-30
emb|CBI17411.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containin...   132   2e-29
ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containin...   130   1e-28
ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [...   120   9e-26

>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Vitis vinifera]
          Length = 1643

 Score =  135 bits (341), Expect = 3e-30
 Identities = 75/142 (52%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3   AHVDFDDKGSWEYLFKVYWLYLKEKLSLNLAELSQAKNPWKEPSTMIYQGLVPVVNGGTN 182
           A VDFDDK SWEYLFKVYW+YLK KLSL L EL++AKNPWK    M  +G         N
Sbjct: 223 AQVDFDDKSSWEYLFKVYWIYLKGKLSLTLEELTRAKNPWKGAGLMARKGESSDELYDAN 282

Query: 183 NVKNSPSDRSFKQLELNSSMTRKCKESLKRCNEETLIIETPANSGK--SLMGSTDWATKE 356
           + K S SD S    E N+S  RK K+  K  N++  +    ++  K   L   T+WA+KE
Sbjct: 283 DDKGSSSDSSSGHQEANTSKRRKTKKQPKFLNKDNSLNVGRSDDSKRTCLPEGTEWASKE 342

Query: 357 LLDFVAHMKNGDTSVLSQFDVQ 422
           LL+ V HMKNGDTSVLSQFDVQ
Sbjct: 343 LLELVGHMKNGDTSVLSQFDVQ 364


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score =  135 bits (341), Expect = 3e-30
 Identities = 75/142 (52%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3   AHVDFDDKGSWEYLFKVYWLYLKEKLSLNLAELSQAKNPWKEPSTMIYQGLVPVVNGGTN 182
           A VDFDDK SWEYLFKVYW+YLK KLSL L EL++AKNPWK    M  +G         N
Sbjct: 223 AQVDFDDKSSWEYLFKVYWIYLKGKLSLTLEELTRAKNPWKGAGLMARKGESSDELYDAN 282

Query: 183 NVKNSPSDRSFKQLELNSSMTRKCKESLKRCNEETLIIETPANSGK--SLMGSTDWATKE 356
           + K S SD S    E N+S  RK K+  K  N++  +    ++  K   L   T+WA+KE
Sbjct: 283 DDKGSSSDSSSGHQEANTSKRRKTKKQPKFLNKDNSLNVGRSDDSKRTCLPEGTEWASKE 342

Query: 357 LLDFVAHMKNGDTSVLSQFDVQ 422
           LL+ V HMKNGDTSVLSQFDVQ
Sbjct: 343 LLELVGHMKNGDTSVLSQFDVQ 364


>ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Glycine max]
          Length = 1953

 Score =  132 bits (333), Expect = 2e-29
 Identities = 74/140 (52%), Positives = 90/140 (64%), Gaps = 2/140 (1%)
 Frame = +3

Query: 9   VDFDDKGSWEYLFKVYWLYLKEKLSLNLAELSQAKNPWKEPSTMIYQGLVPVVNGGTNNV 188
           VDFDDK SWEYLFKVYW+YLK KLSL   EL QAKNPWK  + M Y+   P       + 
Sbjct: 187 VDFDDKSSWEYLFKVYWMYLKGKLSLTFDELLQAKNPWKGAAPMSYKIQSPHELYHLRDD 246

Query: 189 KNSPSDRSFKQLELNSSMTRKCKESLKRCNEETLI--IETPANSGKSLMGSTDWATKELL 362
           K S S+ S   +E N+   +K K   K  ++   +  I +  +SG SL   T WA+KELL
Sbjct: 247 KGSGSENSCIDIESNNLKNKKPKRQPKLLDKGDCLDRITSGGDSGVSLPECTKWASKELL 306

Query: 363 DFVAHMKNGDTSVLSQFDVQ 422
           +FVAHMKNGDTS+LSQFDVQ
Sbjct: 307 EFVAHMKNGDTSLLSQFDVQ 326



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 9    VDFDDKGSWEYLFKVYWLYLKEKLSLNLAELSQAKNPWK 125
            VDFDDK SWEYLFKVYW+YLKEKLSL   E+ QAKNP K
Sbjct: 1488 VDFDDKSSWEYLFKVYWMYLKEKLSLTFDEILQAKNPCK 1526


>ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Glycine max]
          Length = 1365

 Score =  130 bits (326), Expect = 1e-28
 Identities = 72/140 (51%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
 Frame = +3

Query: 9   VDFDDKGSWEYLFKVYWLYLKEKLSLNLAELSQAKNPWKEPSTMIYQGLVPVVNGGTNNV 188
           VDFDDK SWEYLFKVYW+YLK KLSL   EL +AKNPWK  + M Y+   P       + 
Sbjct: 195 VDFDDKSSWEYLFKVYWMYLKGKLSLTFDELLRAKNPWKGAAPMSYKIQSPHELYHLRDD 254

Query: 189 KNSPSDRSFKQLELNSSMTRKCKESLKRCNEETLI--IETPANSGKSLMGSTDWATKELL 362
           K S S+ S   +E N+   +K K   K   +   +  I +  +SG SL   T WA+KELL
Sbjct: 255 KGSGSENSCIDIESNNLKNKKPKRQPKLLGKGDCLDRITSGGDSGVSLPECTKWASKELL 314

Query: 363 DFVAHMKNGDTSVLSQFDVQ 422
           +FVAHMKNGDTS++SQFDVQ
Sbjct: 315 EFVAHMKNGDTSLMSQFDVQ 334


>ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [Arabidopsis
           thaliana] gi|334302924|sp|Q9SD34.3|C3H44_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 44;
           Short=AtC3H44 gi|332645232|gb|AEE78753.1| zinc finger
           CCCH domain-containing protein 44 [Arabidopsis thaliana]
          Length = 1292

 Score =  120 bits (302), Expect = 9e-26
 Identities = 71/139 (51%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
 Frame = +3

Query: 9   VDFDDKGSWEYLFKVYWLYLKEKLSLNLAELSQAKNPWKE-PSTMIYQGLVPVVNGGTNN 185
           VDFDDK SWEYLFKVYWL LKE+LSL + EL++A NPWKE P+T       P V    ++
Sbjct: 220 VDFDDKLSWEYLFKVYWLCLKEELSLTVDELTRANNPWKEVPNT------APKVESQNDH 273

Query: 186 VKNSPSDRSFKQLELNSSMTRKCKESLKRCNEETLIIETPANSGKSLMGSTDWATKELLD 365
             N   D     + +N +  R+  +S    N+  L  + P+N  K   G T WATKELL+
Sbjct: 274 TNNRALD-----VAVNGTKRRRTSDSPTLPNK--LDGKNPSNILKKAPGDTSWATKELLE 326

Query: 366 FVAHMKNGDTSVLSQFDVQ 422
           FV+ MKNGDTSVLSQFDVQ
Sbjct: 327 FVSFMKNGDTSVLSQFDVQ 345


Top