BLASTX nr result

ID: Angelica23_contig00038290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038290
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...    87   2e-15
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]             77   1e-12
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    73   2e-11
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    71   8e-11
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    70   1e-10

>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +1

Query: 127 AVEEAKLWHLRLGHLPFHQIKHLHPSCDVKECVKTNLCQICPIDKKTRNSFPTSTIKTSV 306
           +++E+KLWH RLGHLPFH +K +       +  +T  C ICP+ ++++  FP+STIK+  
Sbjct: 9   SMDESKLWHFRLGHLPFHAMKTIKTLPVTVDNKQTFPCDICPMARQSKPPFPSSTIKSKQ 68

Query: 307 VLELIHIDLWGPYKVKNHNGCTQFL 381
             ELIHID WGPY V  + G   FL
Sbjct: 69  CFELIHIDTWGPYNVPTYKGERYFL 93


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/103 (35%), Positives = 53/103 (51%)
 Frame = +1

Query: 73  YAISPKPMIDAKSFFANAAVEEAKLWHLRLGHLPFHQIKHLHPSCDVKECVKTNLCQICP 252
           + +SP          A + +++  LWH RLGH+P H++        +    K   C ICP
Sbjct: 242 HIVSPTVAYSVSPSVALSTLDDVDLWHRRLGHIP-HKVLQQMQIPHISSSSKLTSCPICP 300

Query: 253 IDKKTRNSFPTSTIKTSVVLELIHIDLWGPYKVKNHNGCTQFL 381
           + K+TR  FP S  +   V +LIH D+WGPYK   H+G   FL
Sbjct: 301 LAKQTRLPFPQSPTRADNVFDLIHADVWGPYKFPTHDGNRYFL 343


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = +1

Query: 97  IDAKSFFANAAVEEAKLWHLRLGHLPFHQIKHLHPSCDVKECV-KTNLCQICPIDKKTRN 273
           ++  +   + A+  ++LWH RLGH P  +  HL P  DV      +  C+IC   K+TR+
Sbjct: 490 VETAAAVTSKALPSSQLWHQRLGH-PSSKALHLLPFSDVTSSTFDSKTCEICIQAKQTRD 548

Query: 274 SFPTSTIKTSVVLELIHIDLWGPYKVKNHNGCTQFL 381
            FP S+ KTS   EL+H DLWGPY+  +  G   FL
Sbjct: 549 PFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFL 584


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
 Frame = +1

Query: 118 ANAAVEEAK---LWHLRLGHLPFHQIKHLHP--SCDVKECVKTNLCQICPIDKKTRNSFP 282
           A+  V+E K   LWH R+GH P  ++  L P  S  V        C +C   K+TRNSFP
Sbjct: 379 ASVTVKEEKNYELWHSRMGH-PAARVVSLIPESSVSVSSTHLNKACDVCHRAKQTRNSFP 437

Query: 283 TSTIKTSVVLELIHIDLWGPYKVKNHNGCTQFL 381
            S  KT  + ELI+ DLWGPY+  +H G   FL
Sbjct: 438 LSINKTLRIFELIYCDLWGPYRTPSHTGARYFL 470


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = +1

Query: 100 DAKSFFANAAVEEAKLWHLRLGHL---PFHQIKHLHPSCDVKECVKTNLCQICPIDKKTR 270
           D     A A  + + LWH RLGH    P   +  ++P          ++C ICP+ K+TR
Sbjct: 523 DQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDS---KHVCDICPLAKQTR 579

Query: 271 NSFPTSTIKTSVVLELIHIDLWGPYKVKNHNGCTQFL 381
            SFP+S I +    +LIH D+WGP+++ +H+G   FL
Sbjct: 580 LSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFL 616


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