BLASTX nr result

ID: Angelica23_contig00038237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038237
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...    69   3e-09
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...    67   1e-08
ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis ...    64   1e-07
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...    64   1e-07
ref|NP_196398.2| SNF2 and helicase domain-containing protein [Ar...    62   5e-07

>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
           endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1241

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = +1

Query: 130 KIIDQELCMAMLSGFLEWLSIHPVLSELDAYEDTERNISSHKLIVFGHHHKILDALQ 300
           K+  QEL +A LSGF EW SIHP++SE D   D +    S K+I+F HHHK+LD LQ
Sbjct: 510 KLSFQELGIAKLSGFREWFSIHPIISESDGLMDLDLKTDSQKMIIFAHHHKVLDGLQ 566


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = +1

Query: 127 KKIIDQELCMAMLSGFLEWLSIHPVLSELDAYEDTERNISSHKLIVFGHHHKILDALQ 300
           KK+  QEL +A LSGF EWLSIHP++SE D     + N SS K+I+F HH K+LD +Q
Sbjct: 31  KKLSYQELGIAKLSGFCEWLSIHPLISESDGVAKLDVNHSSQKMIIFAHHLKVLDGVQ 88


>ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319162|gb|EFH49584.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1194

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +1

Query: 130 KIIDQELCMAMLSGFLEWLSIHPVLSELD-AYEDTERNISSHKLIVFGHHHKILDALQ 300
           K+  Q+L +A LS F EWLS+HP+LS LD   ED + + SS K++VF HHHK+LD +Q
Sbjct: 519 KLSYQQLGIAKLSAFREWLSLHPLLSGLDYTPEDIDGDTSSTKMVVFAHHHKVLDGIQ 576


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
           gi|223546303|gb|EEF47805.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1229

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = +1

Query: 130 KIIDQELCMAMLSGFLEWLSIHPVLSELDAYEDTERNISSHKLIVFGHHHKILDALQ 300
           K+  QEL +A L  F EWLSIHP+++E D   + + N  S K+I+F HHHK+LD +Q
Sbjct: 509 KLSYQELGIAKLPAFREWLSIHPLITESDGVAELDVNCISQKMIIFAHHHKVLDGVQ 565


>ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|332003824|gb|AED91207.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 1190

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = +1

Query: 130 KIIDQELCMAMLSGFLEWLSIHPVLSELD-AYEDTERNISSHKLIVFGHHHKILDALQ 300
           K+  Q+L +A LS F EWLS+HP+LS LD   E+ + + SS K++VF HHHK+LD +Q
Sbjct: 514 KLSYQQLGIAKLSAFREWLSLHPLLSGLDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQ 571


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