BLASTX nr result

ID: Angelica23_contig00038199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038199
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510694.1| hypothetical protein RCOM_1601600 [Ricinus c...    57   2e-06
ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat...    56   4e-06
ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002510694.1| hypothetical protein RCOM_1601600 [Ricinus communis]
           gi|223551395|gb|EEF52881.1| hypothetical protein
           RCOM_1601600 [Ricinus communis]
          Length = 243

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 12/107 (11%)
 Frame = +3

Query: 3   TRLHISRYT---LHKPL----FSTLISPLNHASGEFSDKK---QINVNETQILNELSSLL 152
           TRL  +RY    LH  +    FST    L+    + S  K   Q N++E  IL ELS LL
Sbjct: 13  TRLKKTRYLSTYLHSSISNFPFSTQNCQLDTLGSDPSLTKLNNQSNIDERYILRELSDLL 72

Query: 153 PIRHKNNQIQT-KLTVDTEVTVNSRLVDD-FLLPEEKLRGVFLQKLK 287
           PI HK +  ++ +L   T+ + N  +V D +L PE+KLRGVFLQKLK
Sbjct: 73  PISHKASIARSYELNQSTKQSENRGVVADCYLSPEDKLRGVFLQKLK 119


>ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g43820-like [Cucumis sativus]
          Length = 572

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +3

Query: 42  LFSTLISPLNHASGEFS---DKKQINVNETQILNELSSLLPIRHKNNQIQTKLTVDTEVT 212
           LFSTL  P N      S   D+ Q  ++E  +++ELS LL +    +   T      E  
Sbjct: 42  LFSTLDEPSNLFDDGLSGNGDRNQRCIDERFVISELSDLLLVNPYGSVYNTLKENSIEKQ 101

Query: 213 VNSRLVDDFLLPEEKLRGVFLQKL 284
           +  R VD FLLPEEKLRGVFLQKL
Sbjct: 102 MPVRAVDGFLLPEEKLRGVFLQKL 125


>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
 Frame = +3

Query: 15  ISRYTLHKPLFSTL----ISPLNHASGEFSDKKQINVNETQILNELSSLLPIR------H 164
           I+RY L   L S++    + P   A+ + + K Q N+ E  +LNELS+LLPI       H
Sbjct: 18  ITRYRLPHLLRSSIPFSTLDPPQFATSQDNIKLQYNLGEDYVLNELSNLLPISPKPPIPH 77

Query: 165 KNNQIQTKLTVDTEVTVNSRLVDDFLLPEEKLRGVFLQKLK 287
             N  ++      E+     + D FL PEEKLRGVF+QK+K
Sbjct: 78  PYNHDRSISNKQVEIRP---VFDRFLSPEEKLRGVFVQKIK 115


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