BLASTX nr result

ID: Angelica23_contig00038142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038142
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   147   9e-34
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   147   1e-33
ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   144   1e-32
gb|ACU23482.1| unknown [Glycine max]                                  144   1e-32
ref|XP_004158637.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   143   2e-32

>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
           gi|118482816|gb|ABK93324.1| unknown [Populus
           trichocarpa] gi|222857044|gb|EEE94591.1| f-box family
           protein [Populus trichocarpa]
          Length = 345

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/107 (61%), Positives = 84/107 (78%)
 Frame = +3

Query: 102 MSTLIEGFPDEVSLMILARVPLYLHPRLRLVSHAWKAVVNSVELLRVRQEVNFVEDFMCV 281
           MS LIEG PD V++  +ARVP YLHP+L LVS +W+AVV S EL + RQEV   ED +CV
Sbjct: 1   MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60

Query: 282 CSSEPEKIWQLHDVHHNAWITIPVLPSLIRHLSYFGAVSTAGKLYVL 422
           C+ +PE +WQL+D H + WIT+PVLPS IRHL++FG VS+AGKL+VL
Sbjct: 61  CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVL 107


>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis]
           gi|223535945|gb|EEF37604.1| Protein AFR, putative
           [Ricinus communis]
          Length = 345

 Score =  147 bits (370), Expect = 1e-33
 Identities = 65/107 (60%), Positives = 83/107 (77%)
 Frame = +3

Query: 102 MSTLIEGFPDEVSLMILARVPLYLHPRLRLVSHAWKAVVNSVELLRVRQEVNFVEDFMCV 281
           MS LIEG PD +++  +ARVP YLHP+L LVSH+W++ + S EL + RQEV   ED +CV
Sbjct: 1   MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 282 CSSEPEKIWQLHDVHHNAWITIPVLPSLIRHLSYFGAVSTAGKLYVL 422
           C+ EPE +WQL+D   + WIT+PVLPS IRHL++FG VSTAGKLYVL
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVL 107


>ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1
           [Glycine max] gi|356536141|ref|XP_003536598.1|
           PREDICTED: F-box/kelch-repeat protein SKIP30-like
           isoform 2 [Glycine max] gi|356536143|ref|XP_003536599.1|
           PREDICTED: F-box/kelch-repeat protein SKIP30-like
           isoform 3 [Glycine max]
          Length = 344

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/107 (62%), Positives = 82/107 (76%)
 Frame = +3

Query: 102 MSTLIEGFPDEVSLMILARVPLYLHPRLRLVSHAWKAVVNSVELLRVRQEVNFVEDFMCV 281
           MS LIEG PD V++  LA VP YLHP+L LVS AW+AVV   EL + RQE+   ED +CV
Sbjct: 1   MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 282 CSSEPEKIWQLHDVHHNAWITIPVLPSLIRHLSYFGAVSTAGKLYVL 422
           C+ EPE +WQL+D   + WIT+PVLPS IRHLS+FGAVSTAGKL+V+
Sbjct: 61  CAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVI 107


>gb|ACU23482.1| unknown [Glycine max]
          Length = 344

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/107 (62%), Positives = 82/107 (76%)
 Frame = +3

Query: 102 MSTLIEGFPDEVSLMILARVPLYLHPRLRLVSHAWKAVVNSVELLRVRQEVNFVEDFMCV 281
           MS LIEG PD V++  LA VP YLHP+L LVS AW+AVV   EL + RQE+   ED +CV
Sbjct: 1   MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 282 CSSEPEKIWQLHDVHHNAWITIPVLPSLIRHLSYFGAVSTAGKLYVL 422
           C+ EPE +WQL+D   + WIT+PVLPS IRHLS+FGAVSTAGKL+V+
Sbjct: 61  CAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVI 107


>ref|XP_004158637.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis sativus]
          Length = 347

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/108 (60%), Positives = 85/108 (78%)
 Frame = +3

Query: 99  IMSTLIEGFPDEVSLMILARVPLYLHPRLRLVSHAWKAVVNSVELLRVRQEVNFVEDFMC 278
           +++ LI+G PD V+   LARVP +L+P+L LVSH+W+A + S EL RVRQE+   ED +C
Sbjct: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60

Query: 279 VCSSEPEKIWQLHDVHHNAWITIPVLPSLIRHLSYFGAVSTAGKLYVL 422
           VC+ EPE +WQL+D   + WITIPVLPS IRHL++FGAVSTAGKL+VL
Sbjct: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVL 108


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