BLASTX nr result

ID: Angelica23_contig00038131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038131
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...    46   1e-09
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...    48   3e-07

>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score = 45.8 bits (107), Expect(2) = 1e-09
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = -3

Query: 348 SNIYAAEGRWDDVDKVRRRMVEKGFQKAAGSSVFQVGDPG 229
           SNIYAAEG+WDDV+ VR+ M E+G  K  G S   + + G
Sbjct: 563 SNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFG 602



 Score = 41.6 bits (96), Expect(2) = 1e-09
 Identities = 18/29 (62%), Positives = 25/29 (86%)
 Frame = -2

Query: 226 ESFEVKGSVHKRSMVYSMLSDMGTQIKMS 140
           +SF  K SVH++SM+YS+LSDM TQ+K+S
Sbjct: 604 QSFVEKASVHRKSMMYSILSDMATQMKLS 632


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score = 48.1 bits (113), Expect(2) = 3e-07
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = -3

Query: 348 SNIYAAEGRWDDVDKVRRRMVEKGFQKAAGSSVFQVGD 235
           SN+YAA+GRWDDV+ VR  + EKG QK A SS+  + D
Sbjct: 514 SNMYAAKGRWDDVEHVRLMIKEKGLQKEAASSLVHLED 551



 Score = 31.2 bits (69), Expect(2) = 3e-07
 Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 4/33 (12%)
 Frame = -2

Query: 226 ESFEVK----GSVHKRSMVYSMLSDMGTQIKMS 140
           E FE K     S +++ ++YSMLS++GTQ+K+S
Sbjct: 550 EDFESKYVKNNSGYRKKIMYSMLSELGTQMKLS 582


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