BLASTX nr result

ID: Angelica23_contig00038028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00038028
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318930.1| global transcription factor group [Populus t...   238   3e-61
ref|XP_002330007.1| global transcription factor group [Populus t...   237   6e-61
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   235   2e-60
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   235   2e-60
ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [...   229   1e-58

>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
           gi|222857306|gb|EEE94853.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1082

 Score =  238 bits (608), Expect = 3e-61
 Identities = 113/170 (66%), Positives = 136/170 (80%), Gaps = 3/170 (1%)
 Frame = -3

Query: 502 SSVGPGAYTINADNFKTRLKILYSHWTENCNDLWGSSEIITVATPPPSEDLRYLKSSALN 323
           S+    AY I+ + FKTRLK LYS+W EN  DLWGSS+++ +ATPPPSEDLRYLKSSALN
Sbjct: 12  SNAARNAYAIDVEKFKTRLKALYSNWNENKADLWGSSDVVAIATPPPSEDLRYLKSSALN 71

Query: 322 IWLVGYEFPDTIMAFMKKQIHFLCSQKKASILGGLKGPAKEALDVDIIVHVKSKNDDGTA 143
           IWL+GYEFP+T+M FMKKQIHFLCSQKKAS+L  +K PA+E + VD+++HVK+K D+GT 
Sbjct: 72  IWLLGYEFPETVMVFMKKQIHFLCSQKKASLLEVVKKPAREVVGVDVVMHVKAKTDNGTG 131

Query: 142 LMDAVFRAVRAQSRV---DVPVVGHIARETPEGNLLEKWAEKLKNENFML 2
           LMDA+F A+ AQS     D PVVGHIARE PEG +LE WAEKLK E F L
Sbjct: 132 LMDAIFHAIYAQSSADGKDTPVVGHIAREAPEGIILETWAEKLKGEGFEL 181


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
           gi|222871432|gb|EEF08563.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1065

 Score =  237 bits (605), Expect = 6e-61
 Identities = 114/178 (64%), Positives = 138/178 (77%), Gaps = 8/178 (4%)
 Frame = -3

Query: 511 QRNSSVGPG-----AYTINADNFKTRLKILYSHWTENCNDLWGSSEIITVATPPPSEDLR 347
           QRN S  P       Y I+ + FKTRLK  YS+W EN  DLWGSS+++ +ATPPPSEDLR
Sbjct: 4   QRNGSGQPSNAARNVYAIDVEKFKTRLKAFYSNWNENKADLWGSSDVVAIATPPPSEDLR 63

Query: 346 YLKSSALNIWLVGYEFPDTIMAFMKKQIHFLCSQKKASILGGLKGPAKEALDVDIIVHVK 167
           YLKSSALNIWL+GYEFP+T+M FMKKQIHFLCSQKKAS+L  +K PA+E + VD+++HVK
Sbjct: 64  YLKSSALNIWLLGYEFPETVMVFMKKQIHFLCSQKKASLLEVVKKPAREVVGVDVVMHVK 123

Query: 166 SKNDDGTALMDAVFRAVRAQSRVD---VPVVGHIARETPEGNLLEKWAEKLKNENFML 2
           +K D+GT LM+A+FRA+R+QS  D    PVVGHI RE PEGNLLE W+EKLK   F L
Sbjct: 124 AKTDNGTGLMEAIFRAIRSQSGADGQVAPVVGHIVREAPEGNLLETWSEKLKGAGFEL 181


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  235 bits (600), Expect = 2e-60
 Identities = 112/161 (69%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
 Frame = -3

Query: 481 YTINADNFKTRLKILYSHWTENCNDLWGSSEIITVATPPPSEDLRYLKSSALNIWLVGYE 302
           Y IN DNF  RLK LYSHW E+ +DLWGSS+ + +ATPP S+DLRYLKSSALNIWL+GYE
Sbjct: 23  YAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLKSSALNIWLLGYE 82

Query: 301 FPDTIMAFMKKQIHFLCSQKKASILGGLKGPAKEALDVDIIVHVKSKNDDGTALMDAVFR 122
           FP+TIM FMKKQIHFLCSQKKAS+L  ++  AKEA+ V++++HVK+K+DDGT LMDA+FR
Sbjct: 83  FPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGVEVVMHVKAKSDDGTGLMDAIFR 142

Query: 121 AVRAQSRV-DVPVVGHIARETPEGNLLEKWAEKLKNENFML 2
           AVRA S   D PVVGHI RE PEG LLE W EKLKN +F L
Sbjct: 143 AVRANSSSHDTPVVGHIGREAPEGKLLEMWTEKLKNADFQL 183


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  235 bits (600), Expect = 2e-60
 Identities = 112/161 (69%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
 Frame = -3

Query: 481 YTINADNFKTRLKILYSHWTENCNDLWGSSEIITVATPPPSEDLRYLKSSALNIWLVGYE 302
           Y IN DNF  RLK LYSHW E+ +DLWGSS+ + +ATPP S+DLRYLKSSALNIWL+GYE
Sbjct: 23  YAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLKSSALNIWLLGYE 82

Query: 301 FPDTIMAFMKKQIHFLCSQKKASILGGLKGPAKEALDVDIIVHVKSKNDDGTALMDAVFR 122
           FP+TIM FMKKQIHFLCSQKKAS+L  ++  AKEA+ V++++HVK+K+DDGT LMDA+FR
Sbjct: 83  FPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGVEVVMHVKAKSDDGTGLMDAIFR 142

Query: 121 AVRAQSRV-DVPVVGHIARETPEGNLLEKWAEKLKNENFML 2
           AVRA S   D PVVGHI RE PEG LLE W EKLKN +F L
Sbjct: 143 AVRANSSSHDTPVVGHIGREAPEGKLLEMWTEKLKNADFQL 183


>ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium
           distachyon]
          Length = 1059

 Score =  229 bits (585), Expect = 1e-58
 Identities = 107/164 (65%), Positives = 128/164 (78%)
 Frame = -3

Query: 493 GPGAYTINADNFKTRLKILYSHWTENCNDLWGSSEIITVATPPPSEDLRYLKSSALNIWL 314
           G  AYTIN +NF  RLK+ Y HW +N +DLWGSS+ I +ATPPPSEDLRYLKSSAL++WL
Sbjct: 10  GSAAYTINLENFSKRLKLFYDHWNKNKSDLWGSSDAIAIATPPPSEDLRYLKSSALDVWL 69

Query: 313 VGYEFPDTIMAFMKKQIHFLCSQKKASILGGLKGPAKEALDVDIIVHVKSKNDDGTALMD 134
           +GYEFP+TI+ FM+KQIHFLCSQKKA+++G LK  A EA+  D I+HVK KN DG  LMD
Sbjct: 70  LGYEFPETIIVFMQKQIHFLCSQKKANLIGVLKNAANEAVGADTILHVKGKNGDGIDLMD 129

Query: 133 AVFRAVRAQSRVDVPVVGHIARETPEGNLLEKWAEKLKNENFML 2
            +  AV AQS+ D PVVGHIA+E PEG LLE WAEKL  E+  L
Sbjct: 130 DILHAVCAQSKSDTPVVGHIAKEAPEGKLLETWAEKLSGESVQL 173


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