BLASTX nr result

ID: Angelica23_contig00037900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037900
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   130   9e-29
emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]   130   9e-29
ref|XP_003630975.1| Pentatricopeptide repeat-containing protein ...   123   2e-26
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   122   2e-26
ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat...   120   1e-25

>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/89 (70%), Positives = 73/89 (82%)
 Frame = +3

Query: 3   NIRIARWIFDDIEKPDMVTWTAMIMGYALHGHPRDAISSFEQMILDGVKPSDVVFVAVFT 182
           NIR ARWIFD +E  DMV+WTAMIMGYALHGH  DAIS F++M ++GVKP+ V F+AV T
Sbjct: 387 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 446

Query: 183 ACSHGGMVDEALKYFNSMTRDYGISPCLE 269
           ACSH G+VDEA KYFNSMT+DY I P LE
Sbjct: 447 ACSHAGLVDEAWKYFNSMTQDYRIIPGLE 475


>emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/89 (70%), Positives = 73/89 (82%)
 Frame = +3

Query: 3   NIRIARWIFDDIEKPDMVTWTAMIMGYALHGHPRDAISSFEQMILDGVKPSDVVFVAVFT 182
           NIR ARWIFD +E  DMV+WTAMIMGYALHGH  DAIS F++M ++GVKP+ V F+AV T
Sbjct: 347 NIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLT 406

Query: 183 ACSHGGMVDEALKYFNSMTRDYGISPCLE 269
           ACSH G+VDEA KYFNSMT+DY I P LE
Sbjct: 407 ACSHAGLVDEAWKYFNSMTQDYRIIPGLE 435


>ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524997|gb|AET05451.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/89 (62%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   NIRIARWIFDDIEKPDMVTWTAMIMGYALHGHPRDAISSFEQMILDGVKPSDVVFVAVFT 182
           NI++AR++FD I+K DMV WTA+IMG A+HGH  DA+S FE M+ DGV+P  V F+AV T
Sbjct: 378 NIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLT 437

Query: 183 ACSHGGMVDEALKYFNSMTRDYGISPCLE 269
           ACSH G+VDE  +YFNSM RD+GI+P LE
Sbjct: 438 ACSHAGLVDEGWRYFNSMERDFGIAPGLE 466


>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/89 (66%), Positives = 70/89 (78%)
 Frame = +3

Query: 3   NIRIARWIFDDIEKPDMVTWTAMIMGYALHGHPRDAISSFEQMILDGVKPSDVVFVAVFT 182
           NIR A+ IFD +   DMV+WTAMIMG ALHG   DAI  FEQM  +G+KP+ V F+AV T
Sbjct: 390 NIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLT 449

Query: 183 ACSHGGMVDEALKYFNSMTRDYGISPCLE 269
           ACSHGG+VDEA KYFNSMTRD+GI+P +E
Sbjct: 450 ACSHGGLVDEAWKYFNSMTRDFGIAPGVE 478


>ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/91 (62%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   NIRIARWIFDDIEK--PDMVTWTAMIMGYALHGHPRDAISSFEQMILDGVKPSDVVFVAV 176
           NI++AR+IF+ IE    DMV+WTA+IMG A+HGH  DA+S FE+M++DGVKP  V F+AV
Sbjct: 350 NIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAV 409

Query: 177 FTACSHGGMVDEALKYFNSMTRDYGISPCLE 269
            TACSH G+VDE  KYFNSM RD+G++P LE
Sbjct: 410 LTACSHAGLVDEGWKYFNSMQRDFGVAPGLE 440


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