BLASTX nr result

ID: Angelica23_contig00037790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037790
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16176.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat...   121   7e-26
ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat...   112   4e-23
ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase fa...   109   3e-22

>emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/97 (62%), Positives = 70/97 (72%)
 Frame = +3

Query: 60  RLHYTNPNSNLRPISFTTTSTNKYNDEKFISILNDIVRGKQSWNTQFNNPYISTYLKPHH 239
           R H TNPN   +  +F  +      D +F++ L DIVRG QSW    NN +IS  LKPHH
Sbjct: 7   RPHLTNPNFLRKQRTFCASP-----DSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHH 61

Query: 240 VEKVLIQTLDDSRLALRFFNFLGLHRNFNPSTTSFCI 350
           VEKVLIQTLDDSRLALRFFNFLGLH+NF+ STTSFCI
Sbjct: 62  VEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCI 98


>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/97 (62%), Positives = 70/97 (72%)
 Frame = +3

Query: 60  RLHYTNPNSNLRPISFTTTSTNKYNDEKFISILNDIVRGKQSWNTQFNNPYISTYLKPHH 239
           R H TNPN   +  +F  +      D +F++ L DIVRG QSW    NN +IS  LKPHH
Sbjct: 7   RPHLTNPNFLRKQRTFCASP-----DSQFVACLTDIVRGNQSWRVALNNSFISQTLKPHH 61

Query: 240 VEKVLIQTLDDSRLALRFFNFLGLHRNFNPSTTSFCI 350
           VEKVLIQTLDDSRLALRFFNFLGLH+NF+ STTSFCI
Sbjct: 62  VEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCI 98


>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/110 (56%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
 Frame = +3

Query: 30  MKKHKLIPFQRLHYTNPNSNLRPISFTTTST---NKYNDEKFISILNDIVRGKQSWNTQF 200
           MK H+  P + +    P    +P     TS    N   D +FI+ L +IVRGK+SW   F
Sbjct: 1   MKFHRCHPHRLVLNPIPIFQTKPKHLYCTSAIQDNDVKDSQFIATLRNIVRGKESWKIAF 60

Query: 201 NNPYISTYLKPHHVEKVLIQTLDDSRLALRFFNFLGLHRNFNPSTTSFCI 350
           N+P+IST LKPHHVEKVL+ TLDD+RLALRFFNFLGLH+NFN ST SFCI
Sbjct: 61  NDPFISTKLKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCI 110


>ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
           gi|449501214|ref|XP_004161309.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/107 (57%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
 Frame = +3

Query: 42  KLIPFQRLHYTNPNSNLRPISFTTTSTN----KYNDEKFISILNDIVRGKQSWNTQFNNP 209
           KLI ++R   T      R   F T   N      ND  F+ +L  IVRG QSW   FNN 
Sbjct: 2   KLIAYRRWLRTPNVDGSRFRKFCTRRRNLELDNENDSHFVYVLEQIVRGNQSWKIAFNNS 61

Query: 210 YISTYLKPHHVEKVLIQTLDDSRLALRFFNFLGLHRNFNPSTTSFCI 350
            IS  ++PHHVEKVLI+TLDDSRLALRFFNFLGLHRNF+ ST SFCI
Sbjct: 62  SISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCI 108


>ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
           gi|355508324|gb|AES89466.1|
           UDP-glucoronosyl/UDP-glucosyl transferase family
           protein-like protein [Medicago truncatula]
          Length = 970

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
 Frame = +3

Query: 66  HYTNPNSNLRPI--SFTTTSTNKYNDEKFISILNDIVRGKQSWNTQFNNPYISTYLKPHH 239
           H      +L P+  +F+T+ +   ND  FI+ ++DIVRG  SW   FN+P IS+ LKPHH
Sbjct: 5   HLRRARLSLSPLQRTFSTSKSTNENDTHFITHISDIVRGNLSWKIAFNDPSISSTLKPHH 64

Query: 240 VEKVLIQTLDDSRLALRFFNFLGLHRNFNPSTTSFCI 350
           VE+VLI TL DS+LALRFFNFLGLH+N N +TTSF I
Sbjct: 65  VEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAI 101


Top