BLASTX nr result

ID: Angelica23_contig00037779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037779
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    70   1e-10
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    61   1e-07
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...    60   2e-07
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = +3

Query: 63  MSDAFPPHLLCNIFSRLPVKSQLTFRCVSKSVCALIDSPHFIKTHLQKSLDSNSNRTIIT 242
           M +  PP LL  I +RLPV   L FR +SKS CA ID P+FIKTHL+KS ++NSN T+I 
Sbjct: 1   MLEKLPPELLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIF 60

Query: 243 A 245
           A
Sbjct: 61  A 61


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/72 (50%), Positives = 45/72 (62%)
 Frame = +3

Query: 63  MSDAFPPHLLCNIFSRLPVKSQLTFRCVSKSVCALIDSPHFIKTHLQKSLDSNSNRTIIT 242
           MSD  P  ++ +I SRLP KS L FR  SKS  +LIDS HF   HL +SL   SN T+I 
Sbjct: 1   MSDHLPREVVTDILSRLPAKSLLRFRSTSKSWKSLIDSQHFNSVHLSRSLSLTSNTTLI- 59

Query: 243 ASIDCSDIYYTD 278
             +D SD+Y T+
Sbjct: 60  LRLD-SDLYQTN 70


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +3

Query: 78  PPHLLCNIFSRLPVKSQLTFRCVSKSVCALIDSPHFIKTHLQKSLDSNSNRTIITASID 254
           P  ++ +IF +LPVKS L FR +SK +C+LID P FIK HL  S+ + SN ++I    D
Sbjct: 5   PHEIITDIFQQLPVKSLLRFRSLSKPICSLIDGPDFIKFHLYHSITAKSNHSVILKEWD 63


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +3

Query: 63  MSDAFPPHLLCNIFSRLPVKSQLTFRCVSKSVCALIDSPHFIKTHLQKSLDSNSNRTII 239
           MS  FP  ++ ++  RLPVK+ L FRC+SKS C LID+P FIK HL  S+ +   + +I
Sbjct: 1   MSSLFPD-IIFDVLLRLPVKTLLRFRCISKSYCTLIDNPDFIKAHLDTSIQTKPRKKLI 58


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +3

Query: 81  PHLLCNIFSRLPVKSQLTFRCVSKSVCALIDSPHFIKTHLQKSLDSNSNRTII 239
           P +  +I SRLPVKS   FRCVSKS C  IDSP+FI THL++S  ++++  +I
Sbjct: 5   PEITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLI 57


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