BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037740
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511573.1| pentatricopeptide repeat-containing protein,...   103   1e-20
ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
emb|CAN63945.1| hypothetical protein VITISV_035426 [Vitis vinifera]    85   7e-15
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar...    84   2e-14
emb|CBI24229.3| unnamed protein product [Vitis vinifera]               65   4e-09

>ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550688|gb|EEF52175.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 954

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
 Frame = +1

Query: 1   ESSSVNHGSKYKKNV--SFFNPLQLFNEWSKSRKITYRETKCLHAHLLKTREMHKDPFFA 174
           ++SS     KY++    SF +P   F  + KS   T  ETK +H HL+KT   + +   A
Sbjct: 29  QNSSFTKPIKYEQEEPPSFLDPFHFFTNYIKSADHTVEETKVIHTHLIKTALFNSNTVVA 88

Query: 175 NSLVDFYFKSGSLGYAVKVFDEIPELNVVSWNIMVSGYNENLLYEDS 315
           NSL+D+Y KSG+L YA+KVFD IP  NV+SWN+++SGYN N L+EDS
Sbjct: 89  NSLLDWYCKSGALFYALKVFDTIPNKNVISWNVIISGYNRNSLFEDS 135


>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
           gi|297733984|emb|CBI15231.3| unnamed protein product
           [Vitis vinifera]
          Length = 893

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/103 (42%), Positives = 68/103 (66%)
 Frame = +1

Query: 7   SSVNHGSKYKKNVSFFNPLQLFNEWSKSRKITYRETKCLHAHLLKTREMHKDPFFANSLV 186
           +S N  S +   +  F+P   F++++KS + T R TK LHAH LKT  +  + F  NSL+
Sbjct: 29  NSENFHSTHDTVLPPFDPFHFFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLM 88

Query: 187 DFYFKSGSLGYAVKVFDEIPELNVVSWNIMVSGYNENLLYEDS 315
            +Y KS S+ +A+++FD+ P  NV+SWNI++SG N+N  +EDS
Sbjct: 89  GWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDS 131


>emb|CAN63945.1| hypothetical protein VITISV_035426 [Vitis vinifera]
          Length = 325

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/98 (40%), Positives = 64/98 (65%)
 Frame = +1

Query: 22  GSKYKKNVSFFNPLQLFNEWSKSRKITYRETKCLHAHLLKTREMHKDPFFANSLVDFYFK 201
           G K  + +  F+   +F+ ++KS +   R TK L+AHLLK   +  + F  +SL+D+Y K
Sbjct: 122 GEKPPEVLPPFDHFHIFSNYTKSERCILRNTKILYAHLLKIVILQSNTFMVDSLMDWYCK 181

Query: 202 SGSLGYAVKVFDEIPELNVVSWNIMVSGYNENLLYEDS 315
           S S+ +A K+FD+ P  NV+SW+I++SG N+N  +EDS
Sbjct: 182 SNSMVHAPKLFDKTPHPNVISWDILISGCNQNFSFEDS 219


>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
           gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
           protein; 84160-81473 [Arabidopsis thaliana]
           gi|332197493|gb|AEE35614.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/88 (47%), Positives = 57/88 (64%)
 Frame = +1

Query: 52  FNPLQLFNEWSKSRKITYRETKCLHAHLLKTREMHKDPFFANSLVDFYFKSGSLGYAVKV 231
           FNP + FN+ S SR    R TK L AHLL+   +  D F   SL+ +Y  SGS+  A K+
Sbjct: 47  FNPFRFFNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKL 106

Query: 232 FDEIPELNVVSWNIMVSGYNENLLYEDS 315
           FD IP+ +VVS NIM+SGY ++ L+E+S
Sbjct: 107 FDTIPQPDVVSCNIMISGYKQHRLFEES 134


>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/67 (43%), Positives = 45/67 (67%)
 Frame = +1

Query: 88  SRKITYRETKCLHAHLLKTREMHKDPFFANSLVDFYFKSGSLGYAVKVFDEIPELNVVSW 267
           SR +  +  K +H ++++ R +  D F  +SL+D YFK G++G A  VF  +P+ NVVSW
Sbjct: 223 SRSVNLQLGKFIHGYIIRNR-VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSW 281

Query: 268 NIMVSGY 288
           N+M+SGY
Sbjct: 282 NVMISGY 288