BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037737
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    59   3e-07
ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...    57   1e-06
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               56   3e-06
ref|XP_002520226.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 TGFSVPNIQLYLSIKPTDSNYLH*KAQFLPLLRAYKLFHQITNPSSCPPDFLSDADKASK 73
           TG  VP+   ++SIK   +NY    AQ +P+L++  L   +T  + CPP+F S+ D    
Sbjct: 8   TGVVVPSHSGFMSIKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFKSNTDGTIT 67

Query: 72  TS-NPEYLKWYKKDQLLLSWIILSL 1
           T  +P Y  W+++DQ++LSWI  SL
Sbjct: 68  TEVDPRYATWHQQDQMILSWINNSL 92


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 TGFSVPNIQLYLSIKPTDSNYLH*KAQFLPLLRAYKLFHQITNPSSCPPDFLSDA-DKAS 76
           T F++P     +S K T  NYL  KAQ LP +RA +L   +T    CPP  +SDA D+  
Sbjct: 14  TSFAIP-----VSEKLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPKTISDASDRTV 68

Query: 75  KTSNPEYLKWYKKDQLLLSWIILSL 1
             +NP Y +W  +DQ +L +++ SL
Sbjct: 69  TVANPAYGRWIARDQAVLGYLLSSL 93


>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula]
           gi|355493153|gb|AES74356.1| Histone deacetylase
           [Medicago truncatula]
          Length = 1775

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/89 (32%), Positives = 51/89 (57%)
 Frame = -3

Query: 267 ETQKVTGFSVPNIQLYLSIKPTDSNYLH*KAQFLPLLRAYKLFHQITNPSSCPPDFLSDA 88
           + Q+VT  +    +  +SIK  D+NYL  K Q   +LR  K+   + +P   PP +L+DA
Sbjct: 458 DAQRVTAAASKTFKQVVSIKLDDTNYLQWKQQVEGVLRGTKMVKFVISPE-IPPVYLTDA 516

Query: 87  DKASKTSNPEYLKWYKKDQLLLSWIILSL 1
            + + T N  Y +W ++D LL +W++ ++
Sbjct: 517 AREAGTENSAYTEWEEQDSLLCTWVLSTI 545


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = -3

Query: 243 SVPNIQLYLSIKPTDSNYLH*KAQFLPLLRAYKLFHQITNPSSCPPDFLSD-ADKASKTS 67
           + P++  +L+IK   +NY    AQ  P+L++ KL+  +   + CPP FL D A + +   
Sbjct: 9   NTPSVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKAGQLTDQV 68

Query: 66  NPEYLKWYKKDQLLLSWIILSL 1
           NP++  W  +DQ++LSWI  SL
Sbjct: 69  NPDFEPWILQDQMVLSWINGSL 90


>ref|XP_002520226.1| conserved hypothetical protein [Ricinus communis]
           gi|223540594|gb|EEF42159.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = -3

Query: 234 NIQLYLSIKPTDSNYLH*KAQFLPLLRAYKLFHQITNPSS-CPPDFLSDADKASKTSNPE 58
           NIQ   SIK T  NY+  K QF PL   Y   H I N +   PP  + D++      NPE
Sbjct: 32  NIQQSFSIKLTSKNYIPWKLQFTPLFNLY--LHGIANGTEVAPPREIIDSNVNQSILNPE 89

Query: 57  YLKWYKKDQLLLS 19
           Y  W+ KDQLL S
Sbjct: 90  YTAWFAKDQLLFS 102