BLASTX nr result

ID: Angelica23_contig00037725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037725
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61762.1| putative RNA helicase family protein [Zea mays]        129   3e-28
ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinu...   129   3e-28
ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor...   128   4e-28
emb|CBI15151.3| unnamed protein product [Vitis vinifera]              128   6e-28
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   128   6e-28

>gb|AFW61762.1| putative RNA helicase family protein [Zea mays]
          Length = 639

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/76 (81%), Positives = 70/76 (92%)
 Frame = -3

Query: 230 DYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTVLHIHVTESPGDGDILVFLTGQE 51
           DYFD+APIFK+PGRR+PVEIHYTKAPEADY+DAAIVTVL IHVT+SP  GDILVFLTGQE
Sbjct: 161 DYFDSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTVLQIHVTQSP--GDILVFLTGQE 218

Query: 50  EIESAEEILKQRTKSL 3
           EIE+ +EILK RT+ L
Sbjct: 219 EIETVDEILKHRTRGL 234


>ref|XP_002522713.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538063|gb|EEF39675.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 756

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/74 (85%), Positives = 68/74 (91%)
 Frame = -3

Query: 230 DYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTVLHIHVTESPGDGDILVFLTGQE 51
           DYFD+APIFK+PGRRFPVEIHYTKAPEADYLDAAIVT L IHVT+SP  GDILVF TGQE
Sbjct: 561 DYFDSAPIFKIPGRRFPVEIHYTKAPEADYLDAAIVTALQIHVTQSP--GDILVFFTGQE 618

Query: 50  EIESAEEILKQRTK 9
           EIE+AEEILK RT+
Sbjct: 619 EIETAEEILKHRTR 632


>ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Brachypodium distachyon]
          Length = 1051

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/76 (80%), Positives = 70/76 (92%)
 Frame = -3

Query: 230 DYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTVLHIHVTESPGDGDILVFLTGQE 51
           DYFD+APIFK+PGRR+PVE+HYTKAPEADY+DAAIVTVL IHVT+ P  GDILVFLTGQE
Sbjct: 573 DYFDSAPIFKIPGRRYPVEVHYTKAPEADYIDAAIVTVLQIHVTQPP--GDILVFLTGQE 630

Query: 50  EIESAEEILKQRTKSL 3
           EIE+ +EILKQRT+ L
Sbjct: 631 EIETVDEILKQRTRGL 646


>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -3

Query: 230 DYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTVLHIHVTESPGDGDILVFLTGQE 51
           DYFD+APIFK+PGRR+PVEIHYTKAPEADYLDAAIVT L IHVT+ P  GDILVFLTGQE
Sbjct: 575 DYFDSAPIFKIPGRRYPVEIHYTKAPEADYLDAAIVTALQIHVTQPP--GDILVFLTGQE 632

Query: 50  EIESAEEILKQRTKSL 3
           EIE+AEEI+K RT+ L
Sbjct: 633 EIETAEEIMKHRTRGL 648


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -3

Query: 230 DYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTVLHIHVTESPGDGDILVFLTGQE 51
           DYFD+APIFK+PGRR+PVEIHYTKAPEADYLDAAIVT L IHVT+ P  GDILVFLTGQE
Sbjct: 577 DYFDSAPIFKIPGRRYPVEIHYTKAPEADYLDAAIVTALQIHVTQPP--GDILVFLTGQE 634

Query: 50  EIESAEEILKQRTKSL 3
           EIE+AEEI+K RT+ L
Sbjct: 635 EIETAEEIMKHRTRGL 650


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