BLASTX nr result

ID: Angelica23_contig00037671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037671
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...    84   1e-14
ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-li...    84   1e-14
emb|CBI20795.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...    81   8e-14
ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...    81   1e-13

>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
 Frame = +3

Query: 3    SPSKDLTAINNHLNGPKKLRGMLKFDDA--GIVSDSLVSQCFHHQNGSCASSSGTPIKKE 176
            SPSKDLTAINN LNG +KLRG L FDDA  G+VSDSLV+   + QNGSC SSSG PIK E
Sbjct: 1062 SPSKDLTAINNRLNGTRKLRGTLNFDDADVGLVSDSLVANSLYLQNGSCGSSSGAPIKSE 1121


>ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1024

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
 Frame = +3

Query: 3    SPSKDLTAINNHLNGPKKLRGMLKFDDA--GIVSDSLVSQCFHHQNGSCASSSGTPIKKE 176
            SPSKDLTAINN LNG +KLRG L FDDA  G+VSDSLV+   + QNGSC SSSG PIK E
Sbjct: 961  SPSKDLTAINNRLNGTRKLRGTLNFDDADVGLVSDSLVANSLYLQNGSCGSSSGAPIKSE 1020


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3    SPSKDLTAINNHLNGPKKLRGMLKFDDA-GIVSDSLVSQCFHHQNGSCASSSGTPIK-KE 176
            SPSKDLTAINN LN  +KLRG L FDD  G+VSDSLV++  + QNGSCASSSG P+K ++
Sbjct: 944  SPSKDLTAINNRLNSTRKLRGALNFDDVEGLVSDSLVAKSLYLQNGSCASSSGAPLKLEQ 1003

Query: 177  PD 182
            PD
Sbjct: 1004 PD 1005


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
            gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
            Full=Retinoblastoma-related protein
            gi|359392418|gb|AEV45768.1| RBR protein [Vitis
            pseudoreticulata]
          Length = 1007

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3    SPSKDLTAINNHLNGPKKLRGMLKFDDA-GIVSDSLVSQCFHHQNGSCASSSGTPIK-KE 176
            SPSKDLTAINN LN  +KLRG L FDD  G+VSDSLV++  + QNGSCASSSG P+K ++
Sbjct: 945  SPSKDLTAINNRLNSTRKLRGALNFDDVEGLVSDSLVAKSLYLQNGSCASSSGAPLKLEQ 1004

Query: 177  PD 182
            PD
Sbjct: 1005 PD 1006


>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 3/63 (4%)
 Frame = +3

Query: 3    SPSKDLTAINNHLNGPKKLRGMLKFD--DAGIVSDSLVSQCFHHQNGSCASSSGTPIKKE 176
            SPSKDLTAINN LNG +K+RG L FD  D G+VSDS+V+   + QNGSCASSSG P+K E
Sbjct: 939  SPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSE 998

Query: 177  -PD 182
             PD
Sbjct: 999  QPD 1001


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