BLASTX nr result

ID: Angelica23_contig00037656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037656
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241...    74   9e-12
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]    74   9e-12
ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associat...    62   4e-08
ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associat...    62   4e-08
gb|AAK91899.2|AC091627_12 hypothetical protein SDM1_2t00007 [Sol...    60   1e-07

>ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241425 [Vitis vinifera]
          Length = 722

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
 Frame = +2

Query: 74  CDICGHVGLEDGSDGFYYCQNCGSQANNIRDTGEDVDDFIDLGNPSAFM---SNRRRRTA 244
           C +CG VG  DG+DGF+YC  CGSQA +I DTG   +DF+  G+    +   S+RR+R +
Sbjct: 9   CHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQRHS 68

Query: 245 V---PEPLSQSQPQ 277
           +   PEPLSQSQ Q
Sbjct: 69  IAPKPEPLSQSQSQ 82


>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
          Length = 722

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
 Frame = +2

Query: 74  CDICGHVGLEDGSDGFYYCQNCGSQANNIRDTGEDVDDFIDLGNPSAFM---SNRRRRTA 244
           C +CG VG  DG+DGF+YC  CGSQA +I DTG   +DF+  G+    +   S+RR+R +
Sbjct: 9   CHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQRHS 68

Query: 245 V---PEPLSQSQPQ 277
           +   PEPLSQSQ Q
Sbjct: 69  IAPKPEPLSQSQSQ 82


>ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Cucumis sativus]
          Length = 735

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
 Frame = +2

Query: 74  CDICGHVGLEDGSDGFYYCQNCGSQANNIRDTGEDVDDFI--DLGN---PSAFMSNRRRR 238
           C  CG +GL DG DGF+YC  CGSQA++I DTG   +D +  D+G    P    S+ RRR
Sbjct: 9   CYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIYSQSHTRRR 68

Query: 239 TAV---PEPLSQSQ 271
                  EPLSQSQ
Sbjct: 69  NPTVLKVEPLSQSQ 82


>ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Cucumis sativus]
          Length = 735

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
 Frame = +2

Query: 74  CDICGHVGLEDGSDGFYYCQNCGSQANNIRDTGEDVDDFI--DLGN---PSAFMSNRRRR 238
           C  CG +GL DG DGF+YC  CGSQA++I DTG   +D +  D+G    P    S+ RRR
Sbjct: 9   CYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIYSQSHTRRR 68

Query: 239 TAV---PEPLSQSQ 271
                  EPLSQSQ
Sbjct: 69  NPTVLKVEPLSQSQ 82


>gb|AAK91899.2|AC091627_12 hypothetical protein SDM1_2t00007 [Solanum demissum]
          Length = 664

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 22/42 (52%), Positives = 32/42 (76%)
 Frame = +2

Query: 74  CDICGHVGLEDGSDGFYYCQNCGSQANNIRDTGEDVDDFIDL 199
           C++CG++  +DG DGF+YC  CGSQA +I DTG D DD +++
Sbjct: 9   CEVCGNLSFDDGGDGFFYCTRCGSQAVDIMDTGVDDDDLVNV 50


Top