BLASTX nr result

ID: Angelica23_contig00037598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037598
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510931.1| pentatricopeptide repeat-containing protein,...    94   2e-17
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
gb|ACU21163.1| unknown [Glycine max]                                   93   2e-17
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    92   3e-17
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17

>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/79 (54%), Positives = 58/79 (73%)
 Frame = +2

Query: 161 LSIQKSSPAPIIINQKTYPPSKLEALDAVVKDLETSVNKGIQIDAQTFSSILETCYNFQG 340
           LS    SP P++IN  TY  +KL+ALD V+KDLE+S+ KGI+ID Q  SS+LETCY    
Sbjct: 49  LSFPVPSPTPLLINLNTYTQTKLQALDDVIKDLESSIGKGIKIDTQIISSLLETCYRLNS 108

Query: 341 IQYVVRIHRIIPQALLRRN 397
           I + +RIHR+IP ++LR+N
Sbjct: 109 IDHGMRIHRLIPTSILRKN 127


>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Glycine max]
          Length = 526

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/80 (52%), Positives = 60/80 (75%)
 Frame = +2

Query: 161 LSIQKSSPAPIIINQKTYPPSKLEALDAVVKDLETSVNKGIQIDAQTFSSILETCYNFQG 340
           LS  K    P++I+ + +P +KLEAL+ VVKDLE SV KGI+ID + ++S+LETCY FQ 
Sbjct: 46  LSFPKPKSTPLLIHHRPHPKTKLEALEQVVKDLEASVEKGIKIDPEIYASLLETCYRFQA 105

Query: 341 IQYVVRIHRIIPQALLRRNV 400
           I + +R+HR+IP +LL +NV
Sbjct: 106 ILHGIRVHRLIPTSLLHKNV 125


>gb|ACU21163.1| unknown [Glycine max]
          Length = 481

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/80 (52%), Positives = 60/80 (75%)
 Frame = +2

Query: 161 LSIQKSSPAPIIINQKTYPPSKLEALDAVVKDLETSVNKGIQIDAQTFSSILETCYNFQG 340
           LS  K    P++I+ + +P +KLEAL+ VVKDLE SV KGI+ID + ++S+LETCY FQ 
Sbjct: 46  LSFPKPKSTPLLIHHRPHPKTKLEALEQVVKDLEASVEKGIKIDPEIYASLLETCYRFQA 105

Query: 341 IQYVVRIHRIIPQALLRRNV 400
           I + +R+HR+IP +LL +NV
Sbjct: 106 ILHGIRVHRLIPTSLLHKNV 125


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/80 (55%), Positives = 59/80 (73%)
 Frame = +2

Query: 161 LSIQKSSPAPIIINQKTYPPSKLEALDAVVKDLETSVNKGIQIDAQTFSSILETCYNFQG 340
           LS  KSSP P++I+ K +  SK++ALDAV+ DLE S++ G+ ID + FSS+LE CY  Q 
Sbjct: 10  LSFPKSSPTPLLIHPKPFFQSKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQA 69

Query: 341 IQYVVRIHRIIPQALLRRNV 400
           I + +RIHR+IP  LLRRNV
Sbjct: 70  IHHGIRIHRLIPTNLLRRNV 89


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/80 (55%), Positives = 59/80 (73%)
 Frame = +2

Query: 161 LSIQKSSPAPIIINQKTYPPSKLEALDAVVKDLETSVNKGIQIDAQTFSSILETCYNFQG 340
           LS  KSSP P++I+ K +  SK++ALDAV+ DLE S++ G+ ID + FSS+LE CY  Q 
Sbjct: 10  LSFPKSSPTPLLIHPKPFFQSKIQALDAVLTDLEASIDNGLFIDPEIFSSLLELCYQLQA 69

Query: 341 IQYVVRIHRIIPQALLRRNV 400
           I + +RIHR+IP  LLRRNV
Sbjct: 70  IHHGIRIHRLIPTNLLRRNV 89


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