BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037189
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    68   9e-10
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    68   9e-10
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    67   1e-09
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...    66   3e-09
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    65   7e-09

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/71 (40%), Positives = 45/71 (63%)
 Frame = -2

Query: 218 WHRRLGHPSSQVINNLALNKSLGSFSFREFNFCKDCALGKSTRLPFVSQEHRTTAAFELI 39
           WHRRLGHPSS ++++L  + S+        + C+ C LGK TRLPF +     ++ FE++
Sbjct: 497 WHRRLGHPSSTLLSHLLSSLSISVPKTDLTSLCQACQLGKHTRLPFFNSNTIASSLFEIV 556

Query: 38  YRDVWMSPISS 6
           + D+W SP+ S
Sbjct: 557 HSDIWTSPVPS 567


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/72 (47%), Positives = 42/72 (58%)
 Frame = -2

Query: 218 WHRRLGHPSSQVINNLALNKSLGSFSFREFNFCKDCALGKSTRLPFVSQEHRTTAAFELI 39
           WHRRLGHPSS  I  L     L      + + C  C LGK TRLPF   +  T++ FEL+
Sbjct: 491 WHRRLGHPSSAAIQTLHKLAILPCTKI-DHSLCHACKLGKHTRLPFSRSQSSTSSPFELV 549

Query: 38  YRDVWMSPISST 3
           + DVW SP+ ST
Sbjct: 550 HCDVWTSPVLST 561


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -2

Query: 218 WHRRLGHPSSQVINNLALNKSLG-SFSFREFNFCKDCALGKSTRLPFVSQEHRTTAAFEL 42
           WH RLGHPSS + N+L  +  L    S  +  FC  C LGK+ +LPF     +++    L
Sbjct: 460 WHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLAL 519

Query: 41  IYRDVWMSPISST 3
           I+ DVW+SP+ ST
Sbjct: 520 IHSDVWVSPVQST 532


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268438|emb|CAB80958.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1474

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = -2

Query: 218 WHRRLGHPSSQVINNLALNKSLG-SFSFREFNFCKDCALGKSTRLPFVSQEHRTTAAFEL 42
           WH RLGHPSS ++N L    SL  S S      C DC + KS +LPF     ++T+  E 
Sbjct: 468 WHSRLGHPSSSILNTLISKFSLPVSVSASNKLACSDCFINKSHKLPFSISSIKSTSPLEY 527

Query: 41  IYRDVWMSPISS 6
           I+ DVWMSPI S
Sbjct: 528 IFSDVWMSPILS 539


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
           gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = -2

Query: 218 WHRRLGHPSSQVINNLALNKSLGSFS-FREFNFCKDCALGKSTRLPFVSQEHRTTAAFEL 42
           WH RLGHP+  ++N++  N SL   +   +F  C DC + KS ++PF      +T   E 
Sbjct: 467 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 526

Query: 41  IYRDVWMSPISS 6
           IY DVW SPI S
Sbjct: 527 IYSDVWSSPILS 538