BLASTX nr result
ID: Angelica23_contig00037160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00037160
(1120 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 161 4e-80
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 162 1e-79
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 168 3e-78
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 163 1e-72
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 175 6e-72
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 161 bits (408), Expect(4) = 4e-80
Identities = 70/128 (54%), Positives = 97/128 (75%)
Frame = +1
Query: 10 W*DISLDFIEGLPKSHDKDNIMVVVDRLSKMGHFIALFHPFSALTVAQAFLDNVYKLHGM 189
W I++DF+EGLPKS+ KD I+VVVDRL+K HFIA+ HP++ V + F++N+++LHGM
Sbjct: 1238 WAHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGM 1297
Query: 190 PQTIVSDRDKLFTSNFWKELFNSASTKLHMSTSYHPQSDGQTERLNRYLEQYLRAMVSQR 369
P I++DRD++FTS ++E+F S +L STSYHPQ+DGQTER+N+ LE YLR+M Q
Sbjct: 1298 PMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQE 1357
Query: 370 PKTWAKWL 393
P W WL
Sbjct: 1358 PTRWHSWL 1365
Score = 134 bits (338), Expect(4) = 4e-80
Identities = 68/147 (46%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Frame = +3
Query: 399 AEWWYNSTFNSSIKMSHFEALYGIKLRQICQPNF-CRSSVAAVEDFQVKREALNHILQYA 575
AEWWYN+T+++SI+M+ F+ALYG QI + + C S A + K +A+ L+Y+
Sbjct: 1368 AEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQK-DAIIQKLKYS 1426
Query: 576 IKSAQHKYKYYADKK*RETSL*VGDWVFLKLQPYKQLSVAVRKYLKLSHKYFGPYKVLQR 755
+ AQ + K+YAD+ E +L VGD V+LKLQPY+Q + +R LKL K++GP+K++++
Sbjct: 1427 LTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEK 1486
Query: 756 VGPVAYKLDMPNESLIHPVFHINLFKK 836
VG VAYKL +P S IHPVFH++ KK
Sbjct: 1487 VGRVAYKLQLPEGSNIHPVFHVSQLKK 1513
Score = 43.1 bits (100), Expect(4) = 4e-80
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 923 RGDLAVVQWLVQ*SHVIPEDSSWEDVAVIMDQYPNFHP 1036
RG +AV QWLV ++ P +++WED ++I +P+F+P
Sbjct: 1549 RGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586
Score = 28.9 bits (63), Expect(4) = 4e-80
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 832 KKVGSKYVVSSALPRLGAEGQFIVYPIKVWERR 930
K +GS+ V + LP +G +GQ P+ V +RR
Sbjct: 1513 KHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRR 1545
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 162 bits (411), Expect(4) = 1e-79
Identities = 73/128 (57%), Positives = 95/128 (74%)
Frame = +1
Query: 10 W*DISLDFIEGLPKSHDKDNIMVVVDRLSKMGHFIALFHPFSALTVAQAFLDNVYKLHGM 189
W I++DFIEGLPKS KD I+VVVDRL+K HFIAL HP+ V +AF++N++KLHGM
Sbjct: 1127 WTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGM 1186
Query: 190 PQTIVSDRDKLFTSNFWKELFNSASTKLHMSTSYHPQSDGQTERLNRYLEQYLRAMVSQR 369
P I++DRD++FTS+ ++E+F + KL ST+YHPQ DGQTER+N+ LE YLR M Q
Sbjct: 1187 PMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQE 1246
Query: 370 PKTWAKWL 393
P W WL
Sbjct: 1247 PHKWYSWL 1254
Score = 137 bits (345), Expect(4) = 1e-79
Identities = 68/147 (46%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
Frame = +3
Query: 399 AEWWYNSTFNSSIKMSHFEALYGIKLRQICQPNF-CRSSVAAVEDFQVKREALNHILQYA 575
AEWWYN+TF+++I+M+ F+A+YG QI + + C S A + K LN L+ +
Sbjct: 1257 AEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKEAILNK-LKNS 1315
Query: 576 IKSAQHKYKYYADKK*RETSL*VGDWVFLKLQPYKQLSVAVRKYLKLSHKYFGPYKVLQR 755
+ AQH+ KY+ADK E +L VGD V+LKL+PY+Q + +R LKL K++GP+KVLQ+
Sbjct: 1316 LADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQK 1375
Query: 756 VGPVAYKLDMPNESLIHPVFHINLFKK 836
+G +AYKL +P+++ IHPVFH++ KK
Sbjct: 1376 IGQLAYKLQLPDDAQIHPVFHVSQLKK 1402
Score = 40.0 bits (92), Expect(4) = 1e-79
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 923 RGDLAVVQWLVQ*SHVIPEDSSWEDVAVIMDQYPNFHP 1036
R +AV QWL+ ++ P +++WED +VI +P+F+P
Sbjct: 1438 RKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSFNP 1475
Score = 26.2 bits (56), Expect(4) = 1e-79
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 832 KKVGSKYVVSSALPRLGAEGQFIVYPIKVWERR 930
K +G + S LP +G +GQ P+ V +RR
Sbjct: 1402 KHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRR 1434
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 168 bits (426), Expect(4) = 3e-78
Identities = 75/128 (58%), Positives = 99/128 (77%)
Frame = +1
Query: 10 W*DISLDFIEGLPKSHDKDNIMVVVDRLSKMGHFIALFHPFSALTVAQAFLDNVYKLHGM 189
W I++DFIEGLPKS KD I+VVVDRL+K HF+AL HP++ V Q F+DN++KLHGM
Sbjct: 1263 WTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGM 1322
Query: 190 PQTIVSDRDKLFTSNFWKELFNSASTKLHMSTSYHPQSDGQTERLNRYLEQYLRAMVSQR 369
P IV+DRD++FTSNF++E+F + KL ST++HPQ+DGQTER+N+ LE YLR+M Q
Sbjct: 1323 PMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQE 1382
Query: 370 PKTWAKWL 393
P+ W WL
Sbjct: 1383 PQKWFSWL 1390
Score = 131 bits (329), Expect(4) = 3e-78
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Frame = +3
Query: 399 AEWWYNSTFNSSIKMSHFEALYGIKLRQICQPNF-CRSSVAAVEDFQVKREALNHILQYA 575
AEWWYN+T+++SI+M+ F+ALYG QI + C S A + K L L+ +
Sbjct: 1393 AEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKALILQK-LKSS 1451
Query: 576 IKSAQHKYKYYADKK*RETSL*VGDWVFLKLQPYKQLSVAVRKYLKLSHKYFGPYKVLQR 755
I AQ + K+YADK E +L +GD V+LKLQPY+Q+++ +R LKL KY+GP+KV+++
Sbjct: 1452 IGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEK 1511
Query: 756 VGPVAYKLDMPNESLIHPVFHINLFKK 836
+G VAYKL +P+ + IHPVFH++ KK
Sbjct: 1512 MGAVAYKLQLPDGAGIHPVFHVSQLKK 1538
Score = 37.0 bits (84), Expect(4) = 3e-78
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 938 VVQWLVQ*SHVIPEDSSWEDVAVIMDQYPNFHP 1036
V QWL+ ++ P +++WED + I +PNF P
Sbjct: 1579 VTQWLILWENLTPAEATWEDASYIQAAFPNFQP 1611
Score = 25.0 bits (53), Expect(4) = 3e-78
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 832 KKVGSKYVVSSALPRLGAEGQFIVYPIKVWERR 930
K +G++ + LP +G +GQ P V +RR
Sbjct: 1538 KHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRR 1570
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 163 bits (412), Expect(3) = 1e-72
Identities = 75/128 (58%), Positives = 95/128 (74%)
Frame = +1
Query: 10 W*DISLDFIEGLPKSHDKDNIMVVVDRLSKMGHFIALFHPFSALTVAQAFLDNVYKLHGM 189
W ISLDFIEGLP+S + I+VVVD+ SK HF+ L HPF+AL+VA+ F+ +++KLHG+
Sbjct: 211 WQVISLDFIEGLPRSDHSNCILVVVDKFSKYAHFLPLSHPFTALSVAKLFMKHIFKLHGL 270
Query: 190 PQTIVSDRDKLFTSNFWKELFNSASTKLHMSTSYHPQSDGQTERLNRYLEQYLRAMVSQR 369
P I+SDRDK+FTS W+ LF A TKLH S++YHPQSD QTER+N+ LE YLR V
Sbjct: 271 PLVIISDRDKVFTSQLWEHLFEGAGTKLHFSSAYHPQSDAQTERVNQCLEIYLRCFVHSV 330
Query: 370 PKTWAKWL 393
P WA WL
Sbjct: 331 PTKWAAWL 338
Score = 123 bits (309), Expect(3) = 1e-72
Identities = 65/148 (43%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
Frame = +3
Query: 399 AEWWYNSTFNSSIKMSHFEALYGIKLRQICQPNFCRSSVAAVEDFQV---KREALNHILQ 569
AE+WYN++F+SS++ + FE LYG S A+ D +R + +++Q
Sbjct: 341 AEYWYNTSFHSSVQATPFEVLYGHSPSHFG----IGSQDCAIPDLAQWLKERRLMQNLVQ 396
Query: 570 YAIKSAQHKYKYYADKK*RETSL*VGDWVFLKLQPYKQLSVAVRKYLKLSHKYFGPYKVL 749
+ AQ + K++ADKK S VGDWV+LKLQPY Q SVAVR KL+ KYFGPY+V
Sbjct: 397 QHLHRAQQQMKHFADKKRSFRSFEVGDWVYLKLQPYVQTSVAVRANHKLAFKYFGPYQVT 456
Query: 750 QRVGPVAYKLDMPNESLIHPVFHINLFK 833
++G VAY+L +P+ + IHPVFH++ K
Sbjct: 457 AKIGTVAYQLQLPSSTSIHPVFHVSQLK 484
Score = 35.8 bits (81), Expect(3) = 1e-72
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 923 RGDLAVVQWLVQ*SHVIPEDSSWEDVAVIMDQYP 1024
RG+ AV Q L+Q S +PED++WED+ + ++P
Sbjct: 518 RGNSAVAQVLIQWSASVPEDATWEDLDDLRSRFP 551
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 175 bits (443), Expect(2) = 6e-72
Identities = 83/129 (64%), Positives = 99/129 (76%)
Frame = +1
Query: 7 IW*DISLDFIEGLPKSHDKDNIMVVVDRLSKMGHFIALFHPFSALTVAQAFLDNVYKLHG 186
IW ++S+DFIEGLP S K IMVVVDRLSK HFIAL HP+SALTVA A+LDNV+KLHG
Sbjct: 1152 IWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHG 1211
Query: 187 MPQTIVSDRDKLFTSNFWKELFNSASTKLHMSTSYHPQSDGQTERLNRYLEQYLRAMVSQ 366
P +IVSDRD +FTS FW+E F L ++++YHPQSDGQTE +NR LE YLR M
Sbjct: 1212 CPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHD 1271
Query: 367 RPKTWAKWL 393
RP+ W+KWL
Sbjct: 1272 RPQLWSKWL 1280
Score = 123 bits (309), Expect(2) = 6e-72
Identities = 64/146 (43%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
Frame = +3
Query: 399 AEWWYNSTFNSSIKMSHFEALYGIKLRQICQPNFC-RSSVAAVEDFQVKREALNHILQYA 575
AE+WYN+ ++SS +M+ FE +YG ++ + P S VA V +RE + L++
Sbjct: 1283 AEYWYNTNYHSSSRMTPFEIVYG-QVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFH 1341
Query: 576 IKSAQHKYKYYADKK*RETSL*VGDWVFLKLQPYKQLSVAVRKYLKLSHKYFGPYKVLQR 755
+ AQH+ K +AD+ E +GD+V++KLQPY+Q SV +R KLS KYFGPYK++ R
Sbjct: 1342 LMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDR 1401
Query: 756 VGPVAYKLDMPNESLIHPVFHINLFK 833
G VAYKL +P+ S +HPVFH++ K
Sbjct: 1402 CGEVAYKLALPSYSQVHPVFHVSQLK 1427