BLASTX nr result

ID: Angelica23_contig00037128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037128
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   222   6e-56
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   221   1e-55
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   210   3e-52
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...   209   7e-52
ref|NP_179705.1| pentatricopeptide repeat-containing protein [Ar...   197   2e-48

>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  222 bits (566), Expect = 6e-56
 Identities = 99/161 (61%), Positives = 133/161 (82%)
 Frame = -3

Query: 785 VGLQPDRITFIVILNACSHSGLVQEGLCFFESIKSDHGICPDQEHYACLIDLLGRAGHFD 606
           +G++PDRIT IV+LNACSHSGLVQEGL  +ESI S HG+ P+QEHYACLIDLLGRAGHFD
Sbjct: 411 LGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFD 470

Query: 605 EVLKQLKRMPCEPDSRVWNALLGVSRIHGNIEMGRMAAEHLIKLDPLSCAGYIALSSIYV 426
            ++ QL++MPC+P+  +WNALLGV R+HGNIE GR  AE +I+LDP S A Y+ LSSI+ 
Sbjct: 471 TLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHA 530

Query: 425 ALGKWESAENIRQVMNDRNLKKEQALSW*RTRFKLHAWIAN 303
           A+G+WE  EN+RQ+MN+R+++K++A+SW     K+H++ A+
Sbjct: 531 AVGRWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTAS 571


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  221 bits (563), Expect = 1e-55
 Identities = 102/157 (64%), Positives = 129/157 (82%)
 Frame = -3

Query: 782 GLQPDRITFIVILNACSHSGLVQEGLCFFESIKSDHGICPDQEHYACLIDLLGRAGHFDE 603
           G +PD+ITF+VILNACSHSGLVQ+GL FFES+  D+GI P QEHYACLIDLLGRAG F+E
Sbjct: 421 GAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEE 480

Query: 602 VLKQLKRMPCEPDSRVWNALLGVSRIHGNIEMGRMAAEHLIKLDPLSCAGYIALSSIYVA 423
           V+ QL++MP +PD RVWNALLGV RIHG+IE+GR AAE LI+L+P S   Y+ LSSIY  
Sbjct: 481 VMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAV 540

Query: 422 LGKWESAENIRQVMNDRNLKKEQALSW*RTRFKLHAW 312
           LG+WES + +RQ+MN+R +KKE+A+SW     K+H++
Sbjct: 541 LGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSF 577


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  210 bits (534), Expect = 3e-52
 Identities = 97/160 (60%), Positives = 129/160 (80%)
 Frame = -3

Query: 782 GLQPDRITFIVILNACSHSGLVQEGLCFFESIKSDHGICPDQEHYACLIDLLGRAGHFDE 603
           GL+PDRITFIVIL+ACSHSGLVQEGL FF+++  DHG+ PDQEHYACLIDLLGRAG F E
Sbjct: 424 GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVE 483

Query: 602 VLKQLKRMPCEPDSRVWNALLGVSRIHGNIEMGRMAAEHLIKLDPLSCAGYIALSSIYVA 423
           ++ +L+ M C+PD RVW+ALLGV RIH NIE+GR  AE +I+L P S A Y++L+S+Y  
Sbjct: 484 LVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAF 543

Query: 422 LGKWESAENIRQVMNDRNLKKEQALSW*RTRFKLHAWIAN 303
           LGKWES E +R++M+++ ++KE+ +SW     K H++IA+
Sbjct: 544 LGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIAS 583


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  209 bits (531), Expect = 7e-52
 Identities = 96/160 (60%), Positives = 129/160 (80%)
 Frame = -3

Query: 782 GLQPDRITFIVILNACSHSGLVQEGLCFFESIKSDHGICPDQEHYACLIDLLGRAGHFDE 603
           GL+PDRITFIVIL+ACSHSGLVQEGL FF+++  DHG+ PDQEHY+CLIDLLGRAG F E
Sbjct: 424 GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVE 483

Query: 602 VLKQLKRMPCEPDSRVWNALLGVSRIHGNIEMGRMAAEHLIKLDPLSCAGYIALSSIYVA 423
           ++ +L+ M C+PD RVW+ALLGV RIH NIE+GR  AE +I+L P S A Y++L+S+Y  
Sbjct: 484 LVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAF 543

Query: 422 LGKWESAENIRQVMNDRNLKKEQALSW*RTRFKLHAWIAN 303
           LGKWES E +R++M+++ ++KE+ +SW     K H++IA+
Sbjct: 544 LGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIAS 583


>ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g21090 gi|4803934|gb|AAD29807.1| unknown protein
           [Arabidopsis thaliana] gi|330252028|gb|AEC07122.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 597

 Score =  197 bits (502), Expect = 2e-48
 Identities = 95/156 (60%), Positives = 118/156 (75%)
 Frame = -3

Query: 779 LQPDRITFIVILNACSHSGLVQEGLCFFESIKSDHGICPDQEHYACLIDLLGRAGHFDEV 600
           +QP+R T +VILNACSHSGLV+EGL +FES+   HGI PDQEHYACLIDLLGRAG F E+
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468

Query: 599 LKQLKRMPCEPDSRVWNALLGVSRIHGNIEMGRMAAEHLIKLDPLSCAGYIALSSIYVAL 420
           +++++ MP EPD  +WNA+LGV RIHGN E+G+ AA+ LIKLDP S A YI LSSIY   
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADH 528

Query: 419 GKWESAENIRQVMNDRNLKKEQALSW*RTRFKLHAW 312
           GKWE  E +R VM  R + KE+A+SW     K+ A+
Sbjct: 529 GKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAF 564


Top