BLASTX nr result

ID: Angelica23_contig00037126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037126
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29641.3| unnamed protein product [Vitis vinifera]              343   5e-92
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu...   240   3e-61
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247...   229   1e-57
gb|AEV45824.1| rough endosperm 3-umu1 gamma isoform [Zea mays]        219   8e-55
gb|AEV45830.1| rough endosperm 3 gamma isoform 1 [Zea mays] gi|3...   218   2e-54

>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  343 bits (879), Expect = 5e-92
 Identities = 188/330 (56%), Positives = 214/330 (64%), Gaps = 2/330 (0%)
 Frame = +2

Query: 8   EEEQAKKNQEDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXXXDSDQHIRKE-D 184
           E E+ +  +E+E NEDDDWEY E GP EIIWQGNEII            D DQH RKE D
Sbjct: 97  ELEKKEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKK-DVDQHSRKEED 154

Query: 185 TDRPTSNPLPPQSEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHLKTGACR 364
           T+RPTSNPLPPQSEAF+DH NA  IS+QQL  +V++Q+PNFGTEQDK HCPFH+KTGACR
Sbjct: 155 TERPTSNPLPPQSEAFSDH-NASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTGACR 213

Query: 365 FGSRCSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLEVCK*SPAVI*ILIASRFSGDSS 544
           FG RCSRVHFYPD+SCTLL+KNMYNGPGLAWEQDEGLE              SRF   SS
Sbjct: 214 FGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE-----------KFISRFIWWSS 262

Query: 545 -FWPAWFADNDTTDSSVVISLSWGAGDL*C*MHVTFRV*ASKQQDLMLMHLNS*FSMRET 721
            FWP W              L W                  +Q  L              
Sbjct: 263 WFWP-W--------------LGWT---------------CRRQNPL-------------- 278

Query: 722 VYEHTDXXXXXXXXXXXXDVHTEFLKYGEIVNFKVCKNGAFHLRGNLYVHYQSLDSAVMA 901
              +TD            DV TEFLK+GEIVNFKVC+NG+FHLRGN+YVHY+SLDSAV+A
Sbjct: 279 ---YTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLA 335

Query: 902 YHAMNGRYFAGKQVKCEFVGVTRWKIAICG 991
           YH++NG Y+AGKQV CEFVGVTRWK+AICG
Sbjct: 336 YHSINGLYYAGKQVTCEFVGVTRWKVAICG 365


>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 857

 Score =  240 bits (613), Expect = 3e-61
 Identities = 118/160 (73%), Positives = 131/160 (81%), Gaps = 3/160 (1%)
 Frame = +2

Query: 8   EEEQAKKNQ---EDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXXXDSDQHIRK 178
           +E+ AKK Q   E+E N+DDDWEYVEEGP EIIWQGNEII             +DQ  R 
Sbjct: 113 DEQDAKKFQVEKENEFNDDDDWEYVEEGPAEIIWQGNEIIVRKKKIPKKK--SADQQSRN 170

Query: 179 EDTDRPTSNPLPPQSEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHLKTGA 358
           ED DRPTSNPLPPQSEAFA++Q AP  SA+++LENVAQQ+PNFGTEQDKAHCPFHLKTGA
Sbjct: 171 ED-DRPTSNPLPPQSEAFAEYQKAPMPSAERMLENVAQQIPNFGTEQDKAHCPFHLKTGA 229

Query: 359 CRFGSRCSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLE 478
           CRFG RCSRVHFYPD++ TLLMKNMYNGPGLAWEQDEGLE
Sbjct: 230 CRFGQRCSRVHFYPDKANTLLMKNMYNGPGLAWEQDEGLE 269



 Score =  139 bits (350), Expect = 1e-30
 Identities = 64/88 (72%), Positives = 71/88 (80%)
 Frame = +2

Query: 728 EHTDXXXXXXXXXXXXDVHTEFLKYGEIVNFKVCKNGAFHLRGNLYVHYQSLDSAVMAYH 907
           EHTD            DVHTEFLKYGEIVNFKVCKN +FHLRGN+YV Y+SLDSAV+AY 
Sbjct: 269 EHTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYC 328

Query: 908 AMNGRYFAGKQVKCEFVGVTRWKIAICG 991
           ++NGRYFAGKQV CEFV VTRWK+AICG
Sbjct: 329 SINGRYFAGKQVNCEFVNVTRWKVAICG 356


>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
          Length = 887

 Score =  229 bits (583), Expect = 1e-57
 Identities = 114/166 (68%), Positives = 128/166 (77%), Gaps = 9/166 (5%)
 Frame = +2

Query: 8   EEEQAKKNQEDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXXXDSDQHIRKE-- 181
           E E+ +  +E+E NEDDDWEY E GP EIIWQGNEII            D DQH RKE  
Sbjct: 92  ELEKKEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKK-DVDQHSRKEVL 149

Query: 182 -------DTDRPTSNPLPPQSEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPF 340
                  DT+RPTSNPLPPQSEAF+DH NA  IS+QQL  +V++Q+PNFGTEQDK HCPF
Sbjct: 150 LRLFQLYDTERPTSNPLPPQSEAFSDH-NASIISSQQLFADVSEQIPNFGTEQDKDHCPF 208

Query: 341 HLKTGACRFGSRCSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLE 478
           H+KTGACRFG RCSRVHFYPD+SCTLL+KNMYNGPGLAWEQDEGLE
Sbjct: 209 HIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 254



 Score =  139 bits (349), Expect = 1e-30
 Identities = 62/88 (70%), Positives = 73/88 (82%)
 Frame = +2

Query: 728 EHTDXXXXXXXXXXXXDVHTEFLKYGEIVNFKVCKNGAFHLRGNLYVHYQSLDSAVMAYH 907
           E+TD            DV TEFLK+GEIVNFKVC+NG+FHLRGN+YVHY+SLDSAV+AYH
Sbjct: 254 EYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYH 313

Query: 908 AMNGRYFAGKQVKCEFVGVTRWKIAICG 991
           ++NG Y+AGKQV CEFVGVTRWK+AICG
Sbjct: 314 SINGLYYAGKQVTCEFVGVTRWKVAICG 341


>gb|AEV45824.1| rough endosperm 3-umu1 gamma isoform [Zea mays]
          Length = 311

 Score =  219 bits (558), Expect = 8e-55
 Identities = 103/157 (65%), Positives = 121/157 (77%)
 Frame = +2

Query: 14  EQAKKNQEDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXXXDSDQHIRKEDTDR 193
           +Q K  Q ++  ED +WEYVE+GP EIIW+GNEII             S + ++ ++ DR
Sbjct: 157 KQPKDGQGNQSEEDSEWEYVEDGPAEIIWKGNEIIVKKKKVKVPKG--SKEKLQIQEEDR 214

Query: 194 PTSNPLPPQSEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHLKTGACRFGS 373
           PTSNPLPPQS A A H+  P +SAQ++L+ VAQ+ PNFGTEQDKAHCPFHLKTGACRFG 
Sbjct: 215 PTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRFGL 274

Query: 374 RCSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLEVC 484
           RCSRVHFYPD+S TLLMKNMYNGPGLA EQDEGLEVC
Sbjct: 275 RCSRVHFYPDKSITLLMKNMYNGPGLALEQDEGLEVC 311


>gb|AEV45830.1| rough endosperm 3 gamma isoform 1 [Zea mays]
           gi|359392848|gb|AEV45831.1| rough endosperm 3 gamma
           isoform 2 [Zea mays] gi|359392850|gb|AEV45832.1| rough
           endosperm 3 gamma isoform 3 [Zea mays]
           gi|359392852|gb|AEV45833.1| rough endosperm 3 gamma
           isoform 4 [Zea mays] gi|359392854|gb|AEV45834.1| rough
           endosperm 3 gamma isoform 5 [Zea mays]
           gi|359392856|gb|AEV45835.1| rough endosperm 3 gamma
           isoform 6 [Zea mays] gi|359392858|gb|AEV45836.1| rough
           endosperm 3 gamma isoform 7 [Zea mays]
           gi|359392860|gb|AEV45837.1| rough endosperm 3 gamma
           isoform 8 [Zea mays] gi|359392862|gb|AEV45838.1| rough
           endosperm 3 gamma isoform 9 [Zea mays]
          Length = 276

 Score =  218 bits (554), Expect = 2e-54
 Identities = 103/161 (63%), Positives = 121/161 (75%)
 Frame = +2

Query: 2   ALEEEQAKKNQEDEPNEDDDWEYVEEGPPEIIWQGNEIIXXXXXXXXXXXXDSDQHIRKE 181
           A    + K  Q ++  ED +WEYVE+GP EIIW+GNEII             S + ++ +
Sbjct: 118 ASARNKPKDGQGNQSEEDSEWEYVEDGPAEIIWKGNEIIVKKKKVKVPKG--SKEKLQIQ 175

Query: 182 DTDRPTSNPLPPQSEAFADHQNAPPISAQQLLENVAQQVPNFGTEQDKAHCPFHLKTGAC 361
           + DRPTSNPLPPQS A A H+  P +SAQ++L+ VAQ+ PNFGTEQDKAHCPFHLKTGAC
Sbjct: 176 EEDRPTSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGAC 235

Query: 362 RFGSRCSRVHFYPDRSCTLLMKNMYNGPGLAWEQDEGLEVC 484
           RFG RCSRVHFYPD+S TLLMKNMYNGPGLA EQDEGLEVC
Sbjct: 236 RFGLRCSRVHFYPDKSITLLMKNMYNGPGLALEQDEGLEVC 276


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