BLASTX nr result

ID: Angelica23_contig00037102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037102
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   429   e-118
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-112
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi...   397   e-108
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...   395   e-108

>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  429 bits (1102), Expect = e-118
 Identities = 201/265 (75%), Positives = 235/265 (88%)
 Frame = -3

Query: 846  LSACNHAGLIDLGRQFFSSMIQDYNISPKLQHFGCIIDLLGRAGLFDEAETLIRSMEMKP 667
            LSAC+HAGL++LGRQ FSSM++DY+ISPKLQH+GC+IDLLGRAGLFDEAE L+++MEMKP
Sbjct: 474  LSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP 533

Query: 666  DGVIWASLLSSCRLHNNVELGEYVTEQLLKLEPGNHGAHVLLSNIYAWAGKWDDVARIRT 487
            DG IW SLL +CR+H NVELGE+  + L +LEP N GA+VLLSNIYA AG+WDDVARIRT
Sbjct: 534  DGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRT 593

Query: 486  KLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGHVPDTSE 307
            KLND G+ KVPGC+SIEVDSVVHEF+V D+ H  S++I KMLDE ++LL   GHVPDTSE
Sbjct: 594  KLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSE 653

Query: 306  VLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKMISKIYK 127
            VLYD+DE+ KE  +S HSE+LAIAFGLISTKP TTIRIVKNLRVCGNCH+AIK+ISKI+ 
Sbjct: 654  VLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFN 713

Query: 126  REIIARDRNRFHHFRDGSCSCMDYW 52
            REIIARDRNRFHHF+DGSCSCMDYW
Sbjct: 714  REIIARDRNRFHHFKDGSCSCMDYW 738


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus] gi|449529868|ref|XP_004171920.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  409 bits (1052), Expect = e-112
 Identities = 192/265 (72%), Positives = 227/265 (85%)
 Frame = -3

Query: 846  LSACNHAGLIDLGRQFFSSMIQDYNISPKLQHFGCIIDLLGRAGLFDEAETLIRSMEMKP 667
            LSAC HAGL+DLG+QFFSSM+QDY ISPK QH+GC+IDLLGRAGLF+EAE+L+++ME+KP
Sbjct: 470  LSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKP 529

Query: 666  DGVIWASLLSSCRLHNNVELGEYVTEQLLKLEPGNHGAHVLLSNIYAWAGKWDDVARIRT 487
            DG IW SLL +CR H  VELGE V E+L +LEP N GA+VLLSNIYA AGKWDDVARIRT
Sbjct: 530  DGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRT 589

Query: 486  KLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGHVPDTSE 307
            +LND G+ KVPGCT+IEVD+VVHEF+V D+ HP S +I +ML+E +  L + G V DTSE
Sbjct: 590  RLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSE 649

Query: 306  VLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKMISKIYK 127
            VLYD+DE+ KE  +S HSE+LAIAFGLISTKPGT IRI+KNLRVC NCH+A K+ISKI+ 
Sbjct: 650  VLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFN 709

Query: 126  REIIARDRNRFHHFRDGSCSCMDYW 52
            REIIARDRNRFHHF+DGSCSC DYW
Sbjct: 710  REIIARDRNRFHHFKDGSCSCNDYW 734


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  409 bits (1050), Expect = e-112
 Identities = 191/265 (72%), Positives = 225/265 (84%)
 Frame = -3

Query: 846  LSACNHAGLIDLGRQFFSSMIQDYNISPKLQHFGCIIDLLGRAGLFDEAETLIRSMEMKP 667
            L+AC HAGL+ LGR++FSSMIQDY +SPKL H+GC+IDL GRAGLFDEAETL+++MEMKP
Sbjct: 472  LTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKP 531

Query: 666  DGVIWASLLSSCRLHNNVELGEYVTEQLLKLEPGNHGAHVLLSNIYAWAGKWDDVARIRT 487
            DG IW SLL +CR+H  +EL E V + L +LEP N  A+VLLSNIYA AG+W+DVA+IRT
Sbjct: 532  DGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRT 591

Query: 486  KLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGHVPDTSE 307
            +LND  + KVPGC+SIEVDSVVHEF+V D+ HP S EI KMLDE +  L   G VPDTSE
Sbjct: 592  RLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSE 651

Query: 306  VLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKMISKIYK 127
            VLYD+DE+ KE V+S HSE+LAIAFGLISTKPGTTIRI+KNLRVCGNCH+A K+ISKI+ 
Sbjct: 652  VLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFN 711

Query: 126  REIIARDRNRFHHFRDGSCSCMDYW 52
            REIIARDRNRFHHF+DGSCSC DYW
Sbjct: 712  REIIARDRNRFHHFKDGSCSCKDYW 736


>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 736

 Score =  397 bits (1019), Expect = e-108
 Identities = 186/265 (70%), Positives = 222/265 (83%)
 Frame = -3

Query: 846  LSACNHAGLIDLGRQFFSSMIQDYNISPKLQHFGCIIDLLGRAGLFDEAETLIRSMEMKP 667
            LSAC  AG ++LG ++FSSM +DY ISPKLQH+GC+IDLL R+G FDEA+ L+ +MEM+P
Sbjct: 472  LSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEP 531

Query: 666  DGVIWASLLSSCRLHNNVELGEYVTEQLLKLEPGNHGAHVLLSNIYAWAGKWDDVARIRT 487
            DG IW SLL++CR+H  VE GEYV E+L +LEP N GA+VLLSNIYA AG+WDDVA+IRT
Sbjct: 532  DGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRT 591

Query: 486  KLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGHVPDTSE 307
            KLND G+ KVPGCTSIE+D VVHEF+V D+ HP S  I +MLDE +RLL   G VPDTSE
Sbjct: 592  KLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSE 651

Query: 306  VLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKMISKIYK 127
            VLYD+DE+ KE  ++QHSE+LAIAFGLISTKPG+TIRIVKNLRVC NCH+A K+ISKI+ 
Sbjct: 652  VLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFN 711

Query: 126  REIIARDRNRFHHFRDGSCSCMDYW 52
            REIIARDRNRFHHF+DG CSC D W
Sbjct: 712  REIIARDRNRFHHFKDGFCSCNDRW 736


>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 738

 Score =  395 bits (1016), Expect = e-108
 Identities = 187/265 (70%), Positives = 219/265 (82%)
 Frame = -3

Query: 846  LSACNHAGLIDLGRQFFSSMIQDYNISPKLQHFGCIIDLLGRAGLFDEAETLIRSMEMKP 667
            LSAC  AGL+DLG Q+F SMIQDY ISPKLQH+GC+IDLL RA  F+EAE L+++MEM+P
Sbjct: 474  LSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEP 533

Query: 666  DGVIWASLLSSCRLHNNVELGEYVTEQLLKLEPGNHGAHVLLSNIYAWAGKWDDVARIRT 487
            DG IW SLLS+C+ H  VE GEYV E+L +LEP N GA VLLSNIYA AG+WDDVARIRT
Sbjct: 534  DGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRT 593

Query: 486  KLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGHVPDTSE 307
            +LND G+ KVPGCTSIE+D  VHEF+V D+ HP    I KML+E ++LL   G VP+TSE
Sbjct: 594  RLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSE 653

Query: 306  VLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKMISKIYK 127
            VLYD+DE+ KE  +SQHSE+LAI+FGLI TKPGTTIRIVKNLRVCGNCH+A K+ISKI+ 
Sbjct: 654  VLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFN 713

Query: 126  REIIARDRNRFHHFRDGSCSCMDYW 52
            REIIARDRNRFHHF+DG CSC D W
Sbjct: 714  REIIARDRNRFHHFKDGFCSCNDCW 738


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