BLASTX nr result

ID: Angelica23_contig00037024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037024
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   198   4e-49
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   189   2e-46
ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/140 (62%), Positives = 113/140 (80%)
 Frame = +1

Query: 1   QAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKVGDLSS 180
           QA+KNGVD VL V+NS++HMYGC G ++ A+K+F EM  RDLVSWNS++DA+ K+G L  
Sbjct: 495 QAIKNGVDNVLDVQNSMVHMYGCCGVVEXAEKVFGEMSKRDLVSWNSIIDAYAKLGHLVL 554

Query: 181 AHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVVTACGR 360
           AH+LFD MP +N +SWN+++ GYL  GNPGC LKLFREM     +G +TTMVSV+TAC R
Sbjct: 555 AHRLFDAMPERNAVSWNIMMGGYLKGGNPGCALKLFREMANAGLRGGETTMVSVLTACCR 614

Query: 361 SARLKEGKSVHGYLIRTFVR 420
           SARLKEG+S+HG LIRTF++
Sbjct: 615 SARLKEGRSIHGVLIRTFLK 634



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
 Frame = +1

Query: 124 LVSWNSLVDAFVKVGDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMV- 300
           L+   +L+D + K   +  A  ++D M   N++ WN +I G+   GN   GLKLF EMV 
Sbjct: 637 LILDTALIDMYSKCERVDVARVVYDRMTKXNLVCWNAMILGHCIHGNAEDGLKLFEEMVD 696

Query: 301 -------------------GMRFKGNDTTMVSVVTACGRSARLKEGKSVHGYLIRTF 414
                              G     ++ T + V+ AC R   L EG+S +  +I TF
Sbjct: 697 GIRSEDGEINLDKGIKRIEGQGLJPDEITFIGVLCACAREGLLAEGRSYYSQMINTF 753


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/140 (65%), Positives = 110/140 (78%)
 Frame = +1

Query: 1   QAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKVGDLSS 180
           QAVKNGVD VL VENSL HMYG  G+++VA+ +F  M  RDLVSWNS++D +VKVGDLS+
Sbjct: 162 QAVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSA 221

Query: 181 AHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVVTACGR 360
           AHKLFD+MP +N+++WN LISGY    NPG  LKLFREM  +R + N  TMV  VTACGR
Sbjct: 222 AHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGR 281

Query: 361 SARLKEGKSVHGYLIRTFVR 420
           S RLKEGKSVHG +IR F+R
Sbjct: 282 SGRLKEGKSVHGSMIRLFMR 301



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 21/125 (16%)
 Frame = +1

Query: 103 VEMFVRD-LVSWNSLVDAFVKVGDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGL 279
           + +F+R  L+   +L+D + K G + +A K+F+ M  +N++SWN +I G+   GNP  GL
Sbjct: 296 IRLFMRSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGL 355

Query: 280 KLFREMVGM-RFKG-------------------NDTTMVSVVTACGRSARLKEGKSVHGY 399
            LF  MVGM R KG                   ++ T + ++ AC R+  L EG+S    
Sbjct: 356 SLFDLMVGMERVKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQ 415

Query: 400 LIRTF 414
           +I  F
Sbjct: 416 MIDVF 420


>ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  187 bits (474), Expect = 1e-45
 Identities = 85/138 (61%), Positives = 112/138 (81%)
 Frame = +1

Query: 1   QAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKVGDLSS 180
           QAVKNGVD +L VENSLIH YGC G + +AKK+F EM  RDLVSWNS++D +  +G+L  
Sbjct: 172 QAVKNGVDRILPVENSLIHCYGCCGDMGLAKKVFDEMSHRDLVSWNSIIDGYATLGELGI 231

Query: 181 AHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVVTACGR 360
           AH LF++MP +NV+SWN+LISGYL   NPGC L LFR+M+    +GND+T+VSV++ACGR
Sbjct: 232 AHGLFEVMPERNVVSWNILISGYLKGNNPGCVLMLFRKMMNDGMRGNDSTIVSVLSACGR 291

Query: 361 SARLKEGKSVHGYLIRTF 414
           SARL+EG+SVHG++++ F
Sbjct: 292 SARLREGRSVHGFIVKKF 309



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
 Frame = +1

Query: 121 DLVSWNSLVDAFVKVGDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMV 300
           +++   +L+D + +   +  A ++FD +  +N+  WN +I G+   GNP  GL+LF++MV
Sbjct: 313 NVIHETTLIDMYNRCHKVEMARRIFDKVVRRNLGCWNAMILGHCLHGNPDDGLELFKDMV 372

Query: 301 GMRFKG-------NDTTMVSVVTACGRSARLKEGKSVHGYLI 405
                G       ++ T + V+ AC R+  L EGK+    +I
Sbjct: 373 DRAGLGKRDSVHPDEVTFIGVLCACARAGLLTEGKNFFSQMI 414


>ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 547

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/140 (58%), Positives = 111/140 (79%)
 Frame = +1

Query: 1   QAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKVGDLSS 180
           QA KNGVD V+ + NSLIHMYGC   I++ +K+F EM  +DLVSWNS+V A+ +VGDL +
Sbjct: 173 QAFKNGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNSIVTAYARVGDLYT 232

Query: 181 AHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVVTACGR 360
           AH +FD+MP +NV+SWN++IS YL  GNPGC +KLFR MV +  +GN+TTMV+V++AC R
Sbjct: 233 AHDMFDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLSACSR 292

Query: 361 SARLKEGKSVHGYLIRTFVR 420
           SARL EG+SVHG++ R  ++
Sbjct: 293 SARLNEGRSVHGFMYRASMK 312



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 21/114 (18%)
 Frame = +1

Query: 139 SLVDAFVKVGDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMV------ 300
           +LVD + K   +S A ++FD +  +N+++WN +I G+   GNP  GL+LF EMV      
Sbjct: 320 ALVDMYSKCHRVSVARRVFDRLMIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREI 379

Query: 301 ------GMRFKGND---------TTMVSVVTACGRSARLKEGKSVHGYLIRTFV 417
                 G +FK ++          T + V+ AC R+  LK+ ++    +I  F+
Sbjct: 380 NEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLKDAENYFDEMINVFL 433


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/140 (58%), Positives = 111/140 (79%)
 Frame = +1

Query: 1   QAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKVGDLSS 180
           QA KNGVD V+ + NSLIHMYGC   I++ +K+F EM  +DLVSWNS+V A+ +VGDL +
Sbjct: 172 QAFKNGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNSIVTAYARVGDLYT 231

Query: 181 AHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVVTACGR 360
           AH +FD+MP +NV+SWN++IS YL  GNPGC +KLFR MV +  +GN+TTMV+V++AC R
Sbjct: 232 AHDMFDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLSACSR 291

Query: 361 SARLKEGKSVHGYLIRTFVR 420
           SARL EG+SVHG++ R  ++
Sbjct: 292 SARLNEGRSVHGFMYRASMK 311



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 21/114 (18%)
 Frame = +1

Query: 139 SLVDAFVKVGDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMV------ 300
           +LVD + K   +S A ++FD +  +N+++WN +I G+   GNP  GL+LF EMV      
Sbjct: 319 ALVDMYSKCHRVSVARRVFDRLMIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREI 378

Query: 301 ------GMRFKGND---------TTMVSVVTACGRSARLKEGKSVHGYLIRTFV 417
                 G +FK ++          T + V+ AC R+  LK+ ++    +I  F+
Sbjct: 379 NEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLKDAENYFDEMINVFL 432


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