BLASTX nr result

ID: Angelica23_contig00037008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00037008
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ...   117   1e-24
ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   113   1e-23
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   110   2e-22

>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491987|gb|AES73190.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/80 (70%), Positives = 67/80 (83%)
 Frame = -2

Query: 319 LEKASGLLGLMLSRGFVPHFATSNELLAQLCKAGRAADATKILFGMMNMGFKPEPDSWSL 140
           L KA+ LLGLMLSRGFVPH+ATSNELL +LCK G A DA   LF +++MGF+P+ DSW L
Sbjct: 501 LRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWEL 560

Query: 139 VIDLICRERKLVSVFELLDE 80
           +IDLICR+RKL+ VFELLDE
Sbjct: 561 LIDLICRDRKLLYVFELLDE 580


>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = -2

Query: 319 LEKASGLLGLMLSRGFVPHFATSNELLAQLCKAGRAADATKILFGMMNMGFKPEPDSWSL 140
           L+KA+ L+GLML RG +PHFATSNELL  LC+AG+  DA   L G++ +GFKPEP+SW+L
Sbjct: 428 LQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWAL 487

Query: 139 VIDLICRERKLVSVFELLDE 80
           +++LICRERKL+  FELLD+
Sbjct: 488 LVELICRERKLLPAFELLDD 507


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = -2

Query: 319 LEKASGLLGLMLSRGFVPHFATSNELLAQLCKAGRAADATKILFGMMNMGFKPEPDSWSL 140
           L+KA+ L+GLML RG +PHFATSNELL  LC+AG+  DA   L G++ +GFKPEP+SW+L
Sbjct: 471 LQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWAL 530

Query: 139 VIDLICRERKLVSVFELLDE 80
           +++LICRERKL+  FELLD+
Sbjct: 531 LVELICRERKLLPAFELLDD 550


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/80 (67%), Positives = 63/80 (78%)
 Frame = -2

Query: 319 LEKASGLLGLMLSRGFVPHFATSNELLAQLCKAGRAADATKILFGMMNMGFKPEPDSWSL 140
           L+KA  LLGL LSRGFVPH ATSNELL  LCKAG A DA   L+G+  MGFKPE DSW+L
Sbjct: 418 LDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWAL 477

Query: 139 VIDLICRERKLVSVFELLDE 80
           +++ +CRERKL+  FELLDE
Sbjct: 478 LVEFVCRERKLLLAFELLDE 497


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/80 (66%), Positives = 63/80 (78%)
 Frame = -2

Query: 319 LEKASGLLGLMLSRGFVPHFATSNELLAQLCKAGRAADATKILFGMMNMGFKPEPDSWSL 140
           LEK+  LLGLMLSRGFVPH+ATSNELL  LC+AG   +A   LFG+  MGF PEP SW+ 
Sbjct: 427 LEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAH 486

Query: 139 VIDLICRERKLVSVFELLDE 80
           +I+ ICRERKL+ VFEL+DE
Sbjct: 487 LIEYICRERKLLFVFELVDE 506


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