BLASTX nr result
ID: Angelica23_contig00036989
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00036989
(665 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 223 3e-56
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 221 7e-56
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 214 9e-54
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 214 9e-54
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub... 209 5e-52
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 223 bits (567), Expect = 3e-56
Identities = 121/221 (54%), Positives = 155/221 (70%)
Frame = +1
Query: 1 LSFTQDTLTAAHLVIEDGVLLNRPQMQQLQMFCPQPRSLQLPAIFKASSCNNYSKAISSN 180
LS + D+LTAAHL++E GV L+R QMQQLQMFCP R L + AI KA N
Sbjct: 167 LSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFCP--RQLGMTAIVKAPP---------GN 215
Query: 181 TCWWTGKQLFSLLLPQDFNYKCPSSAVQIIKGEVIVSQSVSSWLRDTKGNLLHYLLSHCQ 360
C+WTGKQLFSLLLP D Y PS+ V I +GE++ S SSWLRD NL + L+ H
Sbjct: 216 ICYWTGKQLFSLLLPSDLEYVFPSNGVCISEGEIVTSSGGSSWLRDASDNLFYSLVKHNG 275
Query: 361 GEFLDFLHAAQGVLSEWLSIRGLSVSLADMHLSSDSDSRKNLTDEVRCGLQDAEYISLIK 540
G+ LD L+AAQ VL EWLS+RGLSVSL+D+++S+DS SR+N+ DEV GLQ+AE +S I+
Sbjct: 276 GDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRENMIDEVCSGLQEAERLSYIQ 335
Query: 541 LLMVDSNLDFLSGSLEESEPARDFGVDHLFYDRQKSAALSQ 663
LLM+ N DFLSG+LEES+ + F + + +QKSA+LSQ
Sbjct: 336 LLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLSQ 376
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 221 bits (564), Expect = 7e-56
Identities = 123/221 (55%), Positives = 156/221 (70%)
Frame = +1
Query: 1 LSFTQDTLTAAHLVIEDGVLLNRPQMQQLQMFCPQPRSLQLPAIFKASSCNNYSKAISSN 180
LSF+QD+L AAHLV+EDGVLL+ QMQQLQMFCP L PA+ KA S N
Sbjct: 495 LSFSQDSLVAAHLVMEDGVLLSLQQMQQLQMFCPH--QLFSPAVRKAPSLNG-------- 544
Query: 181 TCWWTGKQLFSLLLPQDFNYKCPSSAVQIIKGEVIVSQSVSSWLRDTKGNLLHYLLSHCQ 360
C WTGKQL S+LLP+ F+++CPSS V I GE+I S+ S WLRDT GNL L+ CQ
Sbjct: 545 -CAWTGKQLISMLLPRGFDHECPSSDVYIRDGELISSEG-SFWLRDTDGNLFQSLIKQCQ 602
Query: 361 GEFLDFLHAAQGVLSEWLSIRGLSVSLADMHLSSDSDSRKNLTDEVRCGLQDAEYISLIK 540
+ LDFL+ AQ VL EWLS+RGLSVSL+D++L DSDSR+N+ DEV GLQDA+ +K
Sbjct: 603 DQVLDFLYIAQEVLCEWLSMRGLSVSLSDLYLCPDSDSRENMMDEVLFGLQDAKGTCNMK 662
Query: 541 LLMVDSNLDFLSGSLEESEPARDFGVDHLFYDRQKSAALSQ 663
MVDS DFL+ E+ + + +F V+HL +++Q+SAALSQ
Sbjct: 663 QFMVDSCRDFLASIDEDEQYSVNFDVEHLCHEKQRSAALSQ 703
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 214 bits (546), Expect = 9e-54
Identities = 125/221 (56%), Positives = 151/221 (68%)
Frame = +1
Query: 1 LSFTQDTLTAAHLVIEDGVLLNRPQMQQLQMFCPQPRSLQLPAIFKASSCNNYSKAISSN 180
LS +QD+L+AAHLV+EDGVLLN QMQQL+MFCP LQ PAI KA +
Sbjct: 522 LSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPY--QLQSPAIIKAPLLD--------- 570
Query: 181 TCWWTGKQLFSLLLPQDFNYKCPSSAVQIIKGEVIVSQSVSSWLRDTKGNLLHYLLSHCQ 360
T WTGKQLFS+LLP FNY P + V+I GE+I S S+WLRD GNL L+ CQ
Sbjct: 571 TQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQ 630
Query: 361 GEFLDFLHAAQGVLSEWLSIRGLSVSLADMHLSSDSDSRKNLTDEVRCGLQDAEYISLIK 540
G+ LDFL+AAQ VL EWLS+RGLSVSL+D++LSSDS SRKN+ DEV CGL AE K
Sbjct: 631 GKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFK 690
Query: 541 LLMVDSNLDFLSGSLEESEPARDFGVDHLFYDRQKSAALSQ 663
L+VDS+ +FL GS E ++ V L+Y+RQ SAAL Q
Sbjct: 691 QLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALCQ 731
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 214 bits (546), Expect = 9e-54
Identities = 125/221 (56%), Positives = 151/221 (68%)
Frame = +1
Query: 1 LSFTQDTLTAAHLVIEDGVLLNRPQMQQLQMFCPQPRSLQLPAIFKASSCNNYSKAISSN 180
LS +QD+L+AAHLV+EDGVLLN QMQQL+MFCP LQ PAI KA +
Sbjct: 492 LSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPY--QLQSPAIIKAPLLD--------- 540
Query: 181 TCWWTGKQLFSLLLPQDFNYKCPSSAVQIIKGEVIVSQSVSSWLRDTKGNLLHYLLSHCQ 360
T WTGKQLFS+LLP FNY P + V+I GE+I S S+WLRD GNL L+ CQ
Sbjct: 541 TQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQ 600
Query: 361 GEFLDFLHAAQGVLSEWLSIRGLSVSLADMHLSSDSDSRKNLTDEVRCGLQDAEYISLIK 540
G+ LDFL+AAQ VL EWLS+RGLSVSL+D++LSSDS SRKN+ DEV CGL AE K
Sbjct: 601 GKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFK 660
Query: 541 LLMVDSNLDFLSGSLEESEPARDFGVDHLFYDRQKSAALSQ 663
L+VDS+ +FL GS E ++ V L+Y+RQ SAAL Q
Sbjct: 661 QLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALCQ 701
>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
Length = 1461
Score = 209 bits (531), Expect = 5e-52
Identities = 115/221 (52%), Positives = 149/221 (67%)
Frame = +1
Query: 1 LSFTQDTLTAAHLVIEDGVLLNRPQMQQLQMFCPQPRSLQLPAIFKASSCNNYSKAISSN 180
LS +QD+LTAA+L++EDGVLLN QMQQLQM + L PA+ KA S SN
Sbjct: 492 LSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISDKRLIPPAVVKAPS---------SN 542
Query: 181 TCWWTGKQLFSLLLPQDFNYKCPSSAVQIIKGEVIVSQSVSSWLRDTKGNLLHYLLSHCQ 360
+ W+GKQ+FS+LLP DF+Y PS V + GE++ S S WLRD+ N+ L+ H Q
Sbjct: 543 SSLWSGKQIFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQ 602
Query: 361 GEFLDFLHAAQGVLSEWLSIRGLSVSLADMHLSSDSDSRKNLTDEVRCGLQDAEYISLIK 540
G+ L+FL+ AQ VL EWLS+ G SVSL+D++LSSDS +RKN+ +E+ GLQDAE K
Sbjct: 603 GKTLNFLYTAQKVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEIFYGLQDAEQACNFK 662
Query: 541 LLMVDSNLDFLSGSLEESEPARDFGVDHLFYDRQKSAALSQ 663
L++D DFLSGS++ESE A D L Y+RQ SAALSQ
Sbjct: 663 QLLLDCYCDFLSGSIQESENAITVDADRLNYERQISAALSQ 703