BLASTX nr result

ID: Angelica23_contig00036944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036944
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...    94   2e-17
ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16
ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
           gi|297742067|emb|CBI33854.3| unnamed protein product
           [Vitis vinifera]
          Length = 767

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/91 (58%), Positives = 70/91 (76%), Gaps = 4/91 (4%)
 Frame = -3

Query: 262 MPENAVDVFMQTKKIGLTPHIFSCNFLLKCLAEAGMVDYMLSLFDEIRNTGPTPSAYTYT 83
           M ENAVDVF+Q KK GL     SCNFLLKCLAEA   +++ SLF+E+++TGP P+ +TYT
Sbjct: 194 MLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYT 253

Query: 82  IIMSYYCKGE--TANMDT--ATDILEVMERS 2
           I+M++YCKG    A++DT  AT+ILE MER+
Sbjct: 254 IMMNFYCKGNFGEADIDTRQATEILEEMERN 284


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/88 (53%), Positives = 67/88 (76%), Gaps = 3/88 (3%)
 Frame = -3

Query: 262 MPENAVDVFMQTKKIGLTPHIFSCNFLLKCLAEAGMVDYMLSLFDEIRNTGPTPSAYTYT 83
           M  +A DVFMQ KKIG+  +I SCNFLLKCLAE   ++ + SLFD+++N+GP+P+ YTYT
Sbjct: 130 MLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYT 189

Query: 82  IIMSYYCK---GETANMDTATDILEVME 8
           I++++YCK   G+  +M+ A+ ILE ME
Sbjct: 190 IMINFYCKERHGQNIDMEQASLILEEME 217


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/85 (50%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
 Frame = -3

Query: 253 NAVDVFMQTKKIGLTPHIFSCNFLLKCLAEAGMVDYMLSLFDEIRNTGPTPSAYTYTIIM 74
           +A DVF+Q ++ GL  +I SCNFLL C AEA   +++ SLF+E++++GP+P+ +TYTI+M
Sbjct: 196 DAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMM 255

Query: 73  SYYCKGETA-NMD--TATDILEVME 8
           +YYCKG    N+D   AT++LE ME
Sbjct: 256 NYYCKGSFGKNIDIVKATEVLEEME 280


>ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
 Frame = -3

Query: 262 MPENAVDVFMQTKKIGLTPHIFSCNFLLKCLAEAGMVDYMLSLFDEIRNTGPTPSAYTYT 83
           M ENA+DVF   K +GL P I +CNFLLKCL EA  V+++  +F+E+++ GP+P+ YTYT
Sbjct: 262 MLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYT 321

Query: 82  IIMSYYCK--GETANMDTATDILEVMERS 2
           I+M++YC   G  A M  A  IL  + RS
Sbjct: 322 IMMNFYCSDVGCDAGMRQAAVILGKIYRS 350


>ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/85 (38%), Positives = 56/85 (65%)
 Frame = -3

Query: 262 MPENAVDVFMQTKKIGLTPHIFSCNFLLKCLAEAGMVDYMLSLFDEIRNTGPTPSAYTYT 83
           M E+A+  + + KK+G+   +  CNFLLKCL E   + Y  SLFD+++++GP+P+ Y+Y+
Sbjct: 156 MFEDALLTYTEAKKVGVELQL--CNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYS 213

Query: 82  IIMSYYCKGETANMDTATDILEVME 8
           ++MS Y  G+   +  A ++L  ME
Sbjct: 214 VLMSAYTHGDRLYLAEAFELLSEME 238


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