BLASTX nr result

ID: Angelica23_contig00036888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036888
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          72   9e-11
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    70   3e-10
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    69   6e-10
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    68   1e-09
gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    64   2e-08

>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
 Frame = -1

Query: 490 LDSSKRPVIVHRREDTKWTRPEQGKLKVNVDASI--EQGSSCYSIGMILRNHTGVFLEGK 317
           +D+   P +      +KW  P  G  K+NVDA +  E+G     +G+++R+ TG F+   
Sbjct: 419 MDTEGNPTVRGAPRTSKWNAPTAGFYKINVDAGLRAERGGQ---VGIVVRDDTGAFVMAT 475

Query: 316 TMKFSRLXXXXXXXXXXXXXXXEWIVSKGITEVLVESDSQLAVQAINGNASFQLEVSHSI 137
           T  F  L               E+  + G+  V +ESD    V  ++   + + ++S+ I
Sbjct: 476 TRSFPNLVHPTLLEGQAVYTGLEFANALGLERVELESDCLPVVMQLSKGYTDRSDLSNII 535

Query: 136 DICKAILAVRKDICVRHVRRLANRAAHCMARI 41
           D CK +L+  + + + HVRR AN+AAH MA++
Sbjct: 536 DDCKMLLSNFQQVRIAHVRREANQAAHEMAKM 567


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 48/185 (25%), Positives = 76/185 (41%)
 Frame = -1

Query: 577  WDNKIVTSDFVASWSLKQLQDWKTAVSKVLDSSKRPVIVHRREDTKWTRPEQGKLKVNVD 398
            W+ +I  S  V +     L+ W  A   +  +   P        +KW +P+ G +K+NVD
Sbjct: 623  WNGRIWHSQQVVNGCFTMLESWFHANETLATAVTVPSY-----SSKWQKPDYGWIKINVD 677

Query: 397  ASIEQGSSCYSIGMILRNHTGVFLEGKTMKFSRLXXXXXXXXXXXXXXXEWIVSKGITEV 218
             ++       +IG + R+H G F+ G    F                   WI  +  + +
Sbjct: 678  GAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRI 735

Query: 217  LVESDSQLAVQAINGNASFQLEVSHSIDICKAILAVRKDICVRHVRRLANRAAHCMARIP 38
            +VE+D    VQAI   +         I  C  +L    D+ V + RR AN AAHC+A   
Sbjct: 736  VVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGA 795

Query: 37   CELNA 23
            C   +
Sbjct: 796  CSFTS 800


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
 Frame = -1

Query: 577  WDNKIVTSDFVASWSLKQLQDWKTAVSKVLDSSKRPVIVHRREDTKWTRPEQGKLKVNVD 398
            W+N   T+  + + +   L  W+ A +    S + P   +   D KW +P  G+   NVD
Sbjct: 485  WNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPSTPN---DLKWVKPSPGRFTCNVD 541

Query: 397  ASIEQGSSCYSIGMILRNHTGVFLEGKTMKFSRLXXXXXXXXXXXXXXXEWIVSKGITEV 218
            AS  Q  +   IG+ +R+  G F+  KT   + L                W+    +  V
Sbjct: 542  ASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGIV 601

Query: 217  LVESDSQLAVQAINGNASFQLEVSHSIDICKAILA---VRKDICVRHVRRLANRAAHCMA 47
              E DS+  V ++ G+ S     S  I+ C+ +LA   V  D  VR +RR AN  AH  A
Sbjct: 602  DFELDSKSVVDSLYGSTSGVSNFSAVINECRRLLASDLVTSD--VRFIRRQANEVAHSFA 659

Query: 46   RI 41
            R+
Sbjct: 660  RV 661


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 47/179 (26%), Positives = 77/179 (43%)
 Frame = -1

Query: 577 WDNKIVTSDFVASWSLKQLQDWKTAVSKVLDSSKRPVIVHRREDTKWTRPEQGKLKVNVD 398
           WD ++  S+     + + L  W+ A     +S+   V    ++   W  P  G LK NVD
Sbjct: 15  WDGQLQPSNIAVQLARELLFQWQAA----RNSATTQVQQSPQDTIAWQPPAAGFLKCNVD 70

Query: 397 ASIEQGSSCYSIGMILRNHTGVFLEGKTMKFSRLXXXXXXXXXXXXXXXEWIVSKGITEV 218
           A+I    + +  GM +R+  G FL+  T  +                   W+    ++ V
Sbjct: 71  AAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNV 130

Query: 217 LVESDSQLAVQAINGNASFQLEVSHSIDICKAILAVRKDICVRHVRRLANRAAHCMARI 41
            +E D +L V +I    + Q E    ID C+++L    +  +  VRR AN  AH  AR+
Sbjct: 131 QLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQANVVAHSFARV 189


>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
 Frame = -1

Query: 577 WDNKIVTSDFVASWSLKQLQDWKTAVSKVLDSSKRPVIVHRREDTKWTRPEQGKLKVNVD 398
           WDN    S  V + +   L +W              ++     D  W +P    +K NV+
Sbjct: 62  WDNVDTPSLVVCNRARDTLYEWSYM------QHANNLVQEITHDALWEKPPLTVVKCNVE 115

Query: 397 ASIEQGSSCYSIGMILRNHTGVFLEGKT-MKFSRLXXXXXXXXXXXXXXXEWIVSKGITE 221
            ++   +S    G+  R+  G FL G +  +F R+                  +++G+  
Sbjct: 116 CALFNNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTPSEAEATGLLEAVKL-AIARGMQS 174

Query: 220 VLVESDSQLAVQAINGNASFQLEVSHSIDICKAILAVRKDICVRHVRRLANRAAHCMAR 44
           V+ +SD ++ V A+N + +   E+   I  CK +L++  +  VR VRR AN+ AH +AR
Sbjct: 175 VIFKSDCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHANFSVRFVRRQANKVAHNIAR 233


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