BLASTX nr result

ID: Angelica23_contig00036841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036841
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm...   109   3e-26
ref|XP_002334101.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
           gi|223523491|gb|EEF27078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  109 bits (273), Expect(2) = 3e-26
 Identities = 51/54 (94%), Positives = 51/54 (94%)
 Frame = +3

Query: 63  GKKGPKHGRCRTLEWQRKARPYLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 224
           GKKGPKH RCRTLEWQRKA  YLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH
Sbjct: 130 GKKGPKHLRCRTLEWQRKAGSYLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 183



 Score = 33.5 bits (75), Expect(2) = 3e-26
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +2

Query: 8   QACTPYLRLLRQAVDSFIRE 67
           QACT  LRLLRQAVDSFIRE
Sbjct: 112 QACT--LRLLRQAVDSFIRE 129


>ref|XP_002334101.1| predicted protein [Populus trichocarpa] gi|222869592|gb|EEF06723.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -2

Query: 236 HSNSVLSEPCGKVSHHTAHQLDLPR 162
           HSNSVLSEPCGKVSHHTAH+LDLPR
Sbjct: 14  HSNSVLSEPCGKVSHHTAHRLDLPR 38


Top