BLASTX nr result
ID: Angelica23_contig00036750
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00036750
(499 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 274 5e-72
emb|CBI29560.3| unnamed protein product [Vitis vinifera] 274 5e-72
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] 274 5e-72
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ... 239 2e-61
ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar... 230 8e-59
>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 274 bits (701), Expect = 5e-72
Identities = 130/166 (78%), Positives = 146/166 (87%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQ 319
HS AV GF S+ SVNN L+T+Y KNG LD+AK VFYGM G++DEVSWNSMIVAYGQH++
Sbjct: 161 HSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQE 220
Query: 318 GSKALALYQEMVRLEFNVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSG 139
GSKAL L+QEMVR NVDMFTLASVLTAFTCL+DL GG+QFH LIKTGFHQNSHVGSG
Sbjct: 221 GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSG 280
Query: 138 LIDLYSKCRGGMSDCRKVFQEIYDPDLVLWNTMISGYSQNEDYSED 1
LIDLYSKC GGMSDCRKVF+EI +PDLVLWNTM+SGYSQNE++ ED
Sbjct: 281 LIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Score = 71.6 bits (174), Expect = 6e-11
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSK-NGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHR 322
H +K GF + V + L+ YSK G + + ++VF + D V WN+M+ Y Q+
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE-PDLVLWNTMVSGYSQNE 321
Query: 321 QGSK-ALALYQEMVRLEFNVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNS-HV 148
+ + AL +++M + + + + V++A + L G Q H+ +K+ N V
Sbjct: 322 EFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISV 381
Query: 147 GSGLIDLYSKCRGGMSDCRKVFQEIYDPDLVLWNTMISGYSQN 19
+ LI +YSKC G + D R++F + + + V N+MI+GY+Q+
Sbjct: 382 DNALIAMYSKC-GNLQDARRLFDRMAEHNTVSLNSMIAGYAQH 423
Score = 65.9 bits (159), Expect = 3e-09
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = -2
Query: 450 NTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQGSKALALYQEMVRLEF 271
N ++ Y+K A ++F + D VS+N++I AY + + AL L+ M +
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136
Query: 270 NVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSGLIDLYSKCRGGMSDCR 91
++D FTL++V+TA C D+ Q H+ + +GF V + L+ Y K G + D +
Sbjct: 137 DMDGFTLSAVITA--CCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK-NGDLDDAK 193
Query: 90 KVFQEIYD-PDLVLWNTMISGYSQNEDYSE 4
+VF + D V WN+MI Y Q+++ S+
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223
>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 274 bits (701), Expect = 5e-72
Identities = 130/166 (78%), Positives = 146/166 (87%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQ 319
HS AV GF S+ SVNN L+T+Y KNG LD+AK VFYGM G++DEVSWNSMIVAYGQH++
Sbjct: 161 HSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQE 220
Query: 318 GSKALALYQEMVRLEFNVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSG 139
GSKAL L+QEMVR NVDMFTLASVLTAFTCL+DL GG+QFH LIKTGFHQNSHVGSG
Sbjct: 221 GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSG 280
Query: 138 LIDLYSKCRGGMSDCRKVFQEIYDPDLVLWNTMISGYSQNEDYSED 1
LIDLYSKC GGMSDCRKVF+EI +PDLVLWNTM+SGYSQNE++ ED
Sbjct: 281 LIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Score = 65.9 bits (159), Expect = 3e-09
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = -2
Query: 450 NTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQGSKALALYQEMVRLEF 271
N ++ Y+K A ++F + D VS+N++I AY + + AL L+ M +
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136
Query: 270 NVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSGLIDLYSKCRGGMSDCR 91
++D FTL++V+TA C D+ Q H+ + +GF V + L+ Y K G + D +
Sbjct: 137 DMDGFTLSAVITA--CCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK-NGDLDDAK 193
Query: 90 KVFQEIYD-PDLVLWNTMISGYSQNEDYSE 4
+VF + D V WN+MI Y Q+++ S+
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223
>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 274 bits (701), Expect = 5e-72
Identities = 130/166 (78%), Positives = 146/166 (87%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQ 319
HS AV GF S+ SVNN L+T+Y KNG LD+AK VFYGM G++DEVSWNSMIVAYGQH++
Sbjct: 161 HSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQE 220
Query: 318 GSKALALYQEMVRLEFNVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSG 139
GSKAL L+QEMVR NVDMFTLASVLTAFTCL+DL GG+QFH LIKTGFHQNSHVGSG
Sbjct: 221 GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSG 280
Query: 138 LIDLYSKCRGGMSDCRKVFQEIYDPDLVLWNTMISGYSQNEDYSED 1
LIDLYSKC GGMSDCRKVF+EI +PDLVLWNTM+SGYSQNE++ ED
Sbjct: 281 LIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Score = 71.6 bits (174), Expect = 6e-11
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSK-NGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHR 322
H +K GF + V + L+ YSK G + + ++VF + D V WN+M+ Y Q+
Sbjct: 263 HGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE-PDLVLWNTMVSGYSQNE 321
Query: 321 QGSK-ALALYQEMVRLEFNVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNS-HV 148
+ + AL +++M + + + + V++A + L G Q H+ +K+ N V
Sbjct: 322 EFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISV 381
Query: 147 GSGLIDLYSKCRGGMSDCRKVFQEIYDPDLVLWNTMISGYSQN 19
+ LI +YSKC G + D R++F + + + V N+MI+GY+Q+
Sbjct: 382 DNALIAMYSKC-GNLQDARRLFDRMAEHNTVSLNSMIAGYAQH 423
Score = 66.6 bits (161), Expect = 2e-09
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = -2
Query: 450 NTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQGSKALALYQEMVRLEF 271
N ++ Y+K A ++F + D VS+N++I AY + + AL L+ M +
Sbjct: 78 NAIIAAYAKESRPLIAHQLFDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136
Query: 270 NVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSGLIDLYSKCRGGMSDCR 91
++D FTL++V+TA C D+ Q H+ + +GF V + L+ Y K G + D +
Sbjct: 137 DMDXFTLSAVITA--CCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK-NGDLDDAK 193
Query: 90 KVFQEIYD-PDLVLWNTMISGYSQNEDYSE 4
+VF + D V WN+MI Y Q+++ S+
Sbjct: 194 RVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223
>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321830|gb|EFH52251.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 721
Score = 239 bits (610), Expect = 2e-61
Identities = 119/168 (70%), Positives = 134/168 (79%), Gaps = 2/168 (1%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQ 319
H FAV GF S++SVNN VT+YSK G L EA VFYGM+G++DEVSWNSMIVAYGQH++
Sbjct: 161 HCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKE 220
Query: 318 GSKALALYQEMVRLEFNVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSG 139
G+KALALY+EM+ F +DMFTLASVL A T L L GG QFH LIK GFHQNSHVGSG
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 138 LIDLYSKC--RGGMSDCRKVFQEIYDPDLVLWNTMISGYSQNEDYSED 1
LID YSKC R GMSD KVFQEI PDLVLWNTMISGYS NE++SE+
Sbjct: 281 LIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEE 328
Score = 66.2 bits (160), Expect = 3e-09
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Frame = -2
Query: 450 NTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQGSKALALYQEMVRLEF 271
N +V Y+K+ + A+++F D VS+N++I Y R+ A+ L++ M L F
Sbjct: 78 NVIVKAYAKDSKIHIARQLF-DENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGF 136
Query: 270 NVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSGLIDLYSKCRGGMSDCR 91
VD FTL+ ++ A C + Q H F + GF S V + + YSK GG+ R
Sbjct: 137 EVDGFTLSGLIAA--CCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSK--GGL--LR 190
Query: 90 KVFQEIYD----PDLVLWNTMISGYSQNED 13
+ Y D V WN+MI Y Q+++
Sbjct: 191 EAVSVFYGMDGLRDEVSWNSMIVAYGQHKE 220
Score = 57.8 bits (138), Expect = 9e-07
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Frame = -2
Query: 498 HSFAVKCGFVSFT-SVNNTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHR 322
H A+K S SVNN L++ Y K+G L +A+ VF M + + VS+N MI Y QH
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPEL-NAVSFNCMIKGYAQHG 426
Query: 321 QGSKALALYQEMVRLEFNVDMFTLASVLTAFT-CLQDLRGGVQFHAFLIKTGFHQNSHVG 145
G++AL LYQ M+ + T ++L+A C + G F+ +
Sbjct: 427 HGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY 486
Query: 144 SGLIDLYSKCRGGMSDCRKVFQEI-YDPDLVLWNTMISGYSQNED 13
S +IDL + G + + + + Y P V W ++ ++++
Sbjct: 487 SCMIDLLGRA-GKLEEAERFIDAMPYKPGSVAWAALLGACRKHKN 530
>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49710 gi|6723416|emb|CAB66909.1| putative protein
[Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 721
Score = 230 bits (587), Expect = 8e-59
Identities = 115/168 (68%), Positives = 131/168 (77%), Gaps = 2/168 (1%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHRQ 319
H F+V GF S++SVNN VT+YSK G L EA VFYGM+ ++DEVSWNSMIVAYGQH++
Sbjct: 161 HCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE 220
Query: 318 GSKALALYQEMVRLEFNVDMFTLASVLTAFTCLQDLRGGVQFHAFLIKTGFHQNSHVGSG 139
G+KALALY+EM+ F +DMFTLASVL A T L L GG QFH LIK GFHQNSHVGSG
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 138 LIDLYSKCRG--GMSDCRKVFQEIYDPDLVLWNTMISGYSQNEDYSED 1
LID YSKC G GM D KVFQEI PDLV+WNTMISGYS NE+ SE+
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEE 328
Score = 68.9 bits (167), Expect = 4e-10
Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 31/193 (16%)
Frame = -2
Query: 498 HSFAVKCGFVSFTSVNNTLVTHYSKNGFLDEAKEVFYGMEGVK----------------- 370
H+ VK S T ++N V YSK G L A+ FY E
Sbjct: 31 HALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 369 -------------DEVSWNSMIVAYGQHRQGSKALALYQEMVRLEFNVDMFTLASVLTAF 229
D VS+N++I Y R+ A+ L++ M +L F VD FTL+ ++ A
Sbjct: 91 HIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA- 149
Query: 228 TCLQDLRGGVQFHAFLIKTGFHQNSHVGSGLIDLYSKCRGGMSDCRKVFQEIYD-PDLVL 52
C + Q H F + GF S V + + YSK G + + VF + + D V
Sbjct: 150 -CCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK-GGLLREAVSVFYGMDELRDEVS 207
Query: 51 WNTMISGYSQNED 13
WN+MI Y Q+++
Sbjct: 208 WNSMIVAYGQHKE 220
Score = 58.2 bits (139), Expect = 7e-07
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Frame = -2
Query: 498 HSFAVKCGFVSFT-SVNNTLVTHYSKNGFLDEAKEVFYGMEGVKDEVSWNSMIVAYGQHR 322
H A+K S SVNN L++ Y K+G L +A+ VF M + + VS+N MI Y QH
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYAQHG 426
Query: 321 QGSKALALYQEMVRLEFNVDMFTLASVLTAFT-CLQDLRGGVQFHAFLIKTGFHQNSHVG 145
G++AL LYQ M+ + T +VL+A C + G F+ +
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 144 SGLIDLYSKCRGGMSDCRKVFQEI-YDPDLVLWNTMISGYSQNED 13
S +IDL + G + + + + Y P V W ++ ++++
Sbjct: 487 SCMIDLLGRA-GKLEEAERFIDAMPYKPGSVAWAALLGACRKHKN 530