BLASTX nr result

ID: Angelica23_contig00036736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036736
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   170   1e-40
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   164   9e-39
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   155   2e-36
ref|XP_002298539.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
           vinifera]
          Length = 2363

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/115 (71%), Positives = 98/115 (85%)
 Frame = +3

Query: 3   GHERVLVDLLEPTYHHMADSIVLTVAEAMSLYPPSPLFVLVGAVVQYFLKIIRGNIPQAV 182
           GHE V V LLEP + HMAD IVLTVAEAMSL PPSP+F+L+GA V+Y LK+IRGNIPQ V
Sbjct: 296 GHEVVSVHLLEPQFEHMADKIVLTVAEAMSLDPPSPVFILIGAAVRYTLKVIRGNIPQVV 355

Query: 183 TLPSPYHQWSVLNSSVSRIDTTLGRALALNLGVTTVIVEDTRVSGHIQLSSIHVV 347
            LPSPYH+WSVLNSSV+++D+ +G    L+LGVTTV VEDTRV+GHIQ+SS+HVV
Sbjct: 356 ALPSPYHRWSVLNSSVAQVDSQMGLVNVLSLGVTTVTVEDTRVAGHIQMSSLHVV 410


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/115 (71%), Positives = 98/115 (85%)
 Frame = +3

Query: 3   GHERVLVDLLEPTYHHMADSIVLTVAEAMSLYPPSPLFVLVGAVVQYFLKIIRGNIPQAV 182
           GHE V V LLEP + HMAD IVLTVAEAMSL PPSP+F+L+GA V+Y LK+IRGNIPQ V
Sbjct: 221 GHEVVSVHLLEPQFEHMADKIVLTVAEAMSLDPPSPVFILIGAAVRYTLKVIRGNIPQVV 280

Query: 183 TLPSPYHQWSVLNSSVSRIDTTLGRALALNLGVTTVIVEDTRVSGHIQLSSIHVV 347
            LPSPYH+WSVLNSSV+++D+ +G    L+LGVTTV VEDTRV+GHIQ+SS+HVV
Sbjct: 281 ALPSPYHRWSVLNSSVAQVDSQMGLVNVLSLGVTTVTVEDTRVAGHIQMSSLHVV 335


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
           gi|223539369|gb|EEF40960.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 2256

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/115 (69%), Positives = 95/115 (82%)
 Frame = +3

Query: 3   GHERVLVDLLEPTYHHMADSIVLTVAEAMSLYPPSPLFVLVGAVVQYFLKIIRGNIPQAV 182
           GHE V V LLEP   HMAD IVLTVAEAMSL PPSP+++L+GA +QY LK+IRGNIPQ V
Sbjct: 217 GHENVSVHLLEPRLKHMADKIVLTVAEAMSLEPPSPVYILIGAALQYSLKVIRGNIPQVV 276

Query: 183 TLPSPYHQWSVLNSSVSRIDTTLGRALALNLGVTTVIVEDTRVSGHIQLSSIHVV 347
           TLPSPYH WSV NSSV+ +++ +G A ALNLGVT VIVEDTRV+ H+Q SS++VV
Sbjct: 277 TLPSPYHSWSVSNSSVAEVNSMIGFARALNLGVTIVIVEDTRVADHVQTSSLNVV 331


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine
           max]
          Length = 2304

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/115 (66%), Positives = 95/115 (82%)
 Frame = +3

Query: 3   GHERVLVDLLEPTYHHMADSIVLTVAEAMSLYPPSPLFVLVGAVVQYFLKIIRGNIPQAV 182
           GHE V V LLEP   ++AD IVLTVAEAMSL PPSP+FVLVGAV+ Y LK+IRGN+PQ V
Sbjct: 214 GHEIVSVHLLEPQLKNLADEIVLTVAEAMSLDPPSPVFVLVGAVIPYTLKVIRGNVPQVV 273

Query: 183 TLPSPYHQWSVLNSSVSRIDTTLGRALALNLGVTTVIVEDTRVSGHIQLSSIHVV 347
           TLPS +HQWSV N+SV+++D+  G A A NLG+  VIVEDTR++GH+Q+SS++VV
Sbjct: 274 TLPSAHHQWSVSNASVAQVDSKTGLAYAWNLGMAAVIVEDTRIAGHVQVSSLNVV 328


>ref|XP_002298539.1| predicted protein [Populus trichocarpa] gi|222845797|gb|EEE83344.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/115 (66%), Positives = 95/115 (82%)
 Frame = +3

Query: 3   GHERVLVDLLEPTYHHMADSIVLTVAEAMSLYPPSPLFVLVGAVVQYFLKIIRGNIPQAV 182
           GHE V V LLEP + H+AD IVLTVAEAMSL PPSP+ VL+GA  +Y LK+IRGNI Q V
Sbjct: 210 GHENVSVHLLEPQFKHLADKIVLTVAEAMSLEPPSPVLVLIGAAFRYTLKVIRGNILQVV 269

Query: 183 TLPSPYHQWSVLNSSVSRIDTTLGRALALNLGVTTVIVEDTRVSGHIQLSSIHVV 347
            LPSP+H+WSVLNSSV+ +D   G A AL+LGVT+VIV+DTRV+GH+Q+SS++VV
Sbjct: 270 ALPSPHHRWSVLNSSVAEVDHLSGFAQALSLGVTSVIVKDTRVAGHMQVSSLNVV 324


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