BLASTX nr result

ID: Angelica23_contig00036669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036669
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   152   3e-35
emb|CBI29999.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...   135   4e-30
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...   135   4e-30
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   132   4e-29

>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  152 bits (385), Expect = 3e-35
 Identities = 82/140 (58%), Positives = 103/140 (73%), Gaps = 4/140 (2%)
 Frame = -2

Query: 417 QQDSKVLDLVQELVTRLLXXXXXXXXXXXXXTQSLKYALRILSSRMTPSIAVDEAAMADS 238
           +++ +V DL++ELV RLL              +SL+YA+RILSS MTPSIA D AA+A+S
Sbjct: 2   EEEHRVTDLIKELVLRLLSQNPQNPSSSIDTQKSLRYAIRILSSLMTPSIAPDSAAIAES 61

Query: 237 IKRQLATQGKTSDALIFADLYSKFASKSGSGSVNNKWAVLYLLKTIADDRKRGKMGSESR 58
           IKRQLATQGK+S AL FADLY+KFASK+G GS+ NKWAVLYLLK I++DRK  K  S+SR
Sbjct: 62  IKRQLATQGKSSQALAFADLYTKFASKNGPGSIENKWAVLYLLKVISEDRKNQKSRSDSR 121

Query: 57  VGNGFL----LPALFESNVG 10
           V +GF     LPALF++  G
Sbjct: 122 VSSGFSASVGLPALFDAESG 141


>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  147 bits (370), Expect = 2e-33
 Identities = 76/125 (60%), Positives = 95/125 (76%)
 Frame = -2

Query: 417 QQDSKVLDLVQELVTRLLXXXXXXXXXXXXXTQSLKYALRILSSRMTPSIAVDEAAMADS 238
           +++ +V DL++ELV RLL              +SL+YA+RILSS MTPSIA D AA+A+S
Sbjct: 2   EEEHRVTDLIKELVLRLLSQNPQNPSSSIDTQKSLRYAIRILSSLMTPSIAPDSAAIAES 61

Query: 237 IKRQLATQGKTSDALIFADLYSKFASKSGSGSVNNKWAVLYLLKTIADDRKRGKMGSESR 58
           IKRQLATQGK+S AL FADLY+KFASK+G GS+ NKWAVLYLLK I++DRK  K  S+SR
Sbjct: 62  IKRQLATQGKSSQALAFADLYTKFASKNGPGSIENKWAVLYLLKVISEDRKNQKSRSDSR 121

Query: 57  VGNGF 43
           V +GF
Sbjct: 122 VSSGF 126


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score =  135 bits (341), Expect = 4e-30
 Identities = 80/139 (57%), Positives = 100/139 (71%), Gaps = 3/139 (2%)
 Frame = -2

Query: 423 MDQQDS-KVLDLVQELVTRLLXXXXXXXXXXXXXT--QSLKYALRILSSRMTPSIAVDEA 253
           M++ DS KVLDL+++LV RLL                +SL+YA+RIL+SRMTPSIA D A
Sbjct: 1   MEEDDSTKVLDLIKDLVLRLLSHNPTSNSSPTSSDFQKSLRYAIRILTSRMTPSIAPDAA 60

Query: 252 AMADSIKRQLATQGKTSDALIFADLYSKFASKSGSGSVNNKWAVLYLLKTIADDRKRGKM 73
           A+A+SIKR+LAT+GK+S AL FADLY+KFASK+G GSVNNKWAVLYLLK +A+DRK  + 
Sbjct: 61  AIAESIKRRLATEGKSSQALTFADLYTKFASKTGPGSVNNKWAVLYLLKIVAEDRKCRQT 120

Query: 72  GSESRVGNGFLLPALFESN 16
             ES      LLP L  S+
Sbjct: 121 QFES----SMLLPNLVASD 135


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score =  135 bits (341), Expect = 4e-30
 Identities = 80/139 (57%), Positives = 100/139 (71%), Gaps = 3/139 (2%)
 Frame = -2

Query: 423 MDQQDS-KVLDLVQELVTRLLXXXXXXXXXXXXXT--QSLKYALRILSSRMTPSIAVDEA 253
           M++ DS KVLDL+++LV RLL                +SL+YA+RIL+SRMTPSIA D A
Sbjct: 1   MEEDDSTKVLDLIKDLVLRLLSHNPTSNSSPTSSDFQKSLRYAIRILTSRMTPSIAPDAA 60

Query: 252 AMADSIKRQLATQGKTSDALIFADLYSKFASKSGSGSVNNKWAVLYLLKTIADDRKRGKM 73
           A+A+SIKR+LAT+GK+S AL FADLY+KFASK+G GSVNNKWAVLYLLK +A+DRK  + 
Sbjct: 61  AIAESIKRRLATEGKSSQALTFADLYTKFASKTGPGSVNNKWAVLYLLKIVAEDRKCRQT 120

Query: 72  GSESRVGNGFLLPALFESN 16
             ES      LLP L  S+
Sbjct: 121 QFES----SMLLPNLVASD 135


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  132 bits (332), Expect = 4e-29
 Identities = 73/127 (57%), Positives = 93/127 (73%), Gaps = 6/127 (4%)
 Frame = -2

Query: 423 MDQQDS-KVLDLVQELVTRLLXXXXXXXXXXXXXTQS-----LKYALRILSSRMTPSIAV 262
           M+++D  K++DLV+ELV RLL               +     L+YA+RILSSR+TPSI+ 
Sbjct: 1   MEEEDQQKIIDLVKELVHRLLSQNPNFKTPNSNPNSTDFQNALRYAVRILSSRLTPSISP 60

Query: 261 DEAAMADSIKRQLATQGKTSDALIFADLYSKFASKSGSGSVNNKWAVLYLLKTIADDRKR 82
           D AA+A+SIKR+LATQGK+S AL FADLY+KFASK+G GSVNNKWAVLYLLK I++D K 
Sbjct: 61  DSAAIAESIKRRLATQGKSSQALTFADLYNKFASKNGPGSVNNKWAVLYLLKIISEDEKL 120

Query: 81  GKMGSES 61
            K G+ S
Sbjct: 121 AKNGTNS 127


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