BLASTX nr result
ID: Angelica23_contig00036360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00036360
(268 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,... 117 1e-24
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2... 115 3e-24
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi... 103 1e-20
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-19
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar... 96 3e-18
>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 817
Score = 117 bits (293), Expect = 1e-24
Identities = 53/89 (59%), Positives = 69/89 (77%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK GKV+KAEEIL E GLV EVI+NT ++GYCR+GD+ K I E+ME +GL+P+
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKMVQ 1
+TFN+LI+KFCD +MDKAE W+KKM +
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAE 449
Score = 68.6 bits (166), Expect = 5e-10
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = -2
Query: 264 CKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPSC 85
C ++DKAEE + + E+G+ P+ +NT++DGY ++ + I E+ME G+KP+
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491
Query: 84 VTFNTLINKFCDSGDMDKAEIWLKKMV 4
V++ +LIN C G + +AEI L+ M+
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMI 518
Score = 67.8 bits (164), Expect = 9e-10
Identities = 30/87 (34%), Positives = 54/87 (62%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK GK+ +AE +L ++ RG++P ++N ++DG C VG + + F++M + P+
Sbjct: 501 LCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPT 560
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKM 7
VT+N LI+ C G + +AE +L ++
Sbjct: 561 LVTYNVLIDGLCKKGKLTEAEDFLTQI 587
Score = 62.4 bits (150), Expect = 4e-08
Identities = 28/87 (32%), Positives = 53/87 (60%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LC+ ++ AE++ + + LV + V +NT++DGYC+VG++ + E+M+ + P+
Sbjct: 221 LCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKM 7
+TFN+L++ C M +A LK+M
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEM 307
Score = 59.3 bits (142), Expect = 3e-07
Identities = 27/89 (30%), Positives = 52/89 (58%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK GK+ +AE+ L + G P + +N+++ GY G+++K + ++E M+ G+KP+
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKMVQ 1
T++ LI+ C ++ E +M+Q
Sbjct: 631 VRTYHPLISG-CSKEGIELVEKLYNEMLQ 658
>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
predicted protein [Populus trichocarpa]
Length = 707
Score = 115 bits (289), Expect = 3e-24
Identities = 51/88 (57%), Positives = 72/88 (81%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK GKV+KAEE+L +L+E GLVP EVI+NTI++GYC++GD+ + I E+ME GL+P+
Sbjct: 252 LCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPN 311
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKMV 4
C+ FN++I+KFC+ +DKAE W+KKMV
Sbjct: 312 CIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Score = 70.1 bits (170), Expect = 2e-10
Identities = 30/87 (34%), Positives = 55/87 (63%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK ++ AE++ + R LVP V FNT++DGYC+ G++ I + E+M+ ++PS
Sbjct: 111 LCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPS 170
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKM 7
+TFN+L++ C + +++A L ++
Sbjct: 171 IITFNSLLSGLCKARRIEEARCMLNEI 197
Score = 67.8 bits (164), Expect = 9e-10
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK GK+ +AE +L ++ RG++P I+N ++DG C VG + + + F++M G+ +
Sbjct: 392 LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT 451
Query: 87 CVTFNTLINKFCDSGDMDKAE 25
VT+N+LI C G + +AE
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAE 472
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/87 (34%), Positives = 54/87 (62%)
Frame = -2
Query: 264 CKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPSC 85
C+ +DKAEE + ++ +G+ P+ +N ++DGY R+ ++ I E+ME G KP+
Sbjct: 323 CEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNV 382
Query: 84 VTFNTLINKFCDSGDMDKAEIWLKKMV 4
+++ +LIN C G + +AE+ L+ MV
Sbjct: 383 ISYGSLINCLCKDGKILEAEMVLRDMV 409
Score = 56.6 bits (135), Expect = 2e-06
Identities = 29/89 (32%), Positives = 49/89 (55%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK GK+ +AEE+ + G P + +N+++ GY G+ K + ++E M+ GLKP+
Sbjct: 462 LCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKMVQ 1
TF+ LI+ C + E +M+Q
Sbjct: 522 INTFHPLISG-CSKEGIKLKETLFNEMLQ 549
>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 103 bits (258), Expect = 1e-20
Identities = 47/89 (52%), Positives = 66/89 (74%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK G ++KAEE+L +E GL P V FNTI++GYC+VGDI K + EKME GL+P+
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKMVQ 1
VT+N+L+ KFC+ +M++AE +KKMV+
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVE 455
Score = 73.6 bits (179), Expect = 2e-11
Identities = 29/87 (33%), Positives = 60/87 (68%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK ++ AE++ + +++R + P + +NT++DGYC+VG + + +I E+M+ ++P+
Sbjct: 227 LCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPT 286
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKM 7
+TFN+L+N C + M++A+ L++M
Sbjct: 287 IITFNSLLNGLCRAQMMEEAQRVLEEM 313
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK + +AE IL ++ RG+VP I+N ++DG C G + F++M + P+
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566
Query: 87 CVTFNTLINKFCDSGDMDKAE 25
VT+N LIN C G + +AE
Sbjct: 567 LVTYNILINGLCKKGKVMEAE 587
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/87 (33%), Positives = 53/87 (60%)
Frame = -2
Query: 264 CKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPSC 85
C+ +++AE+ + ++E+G++P +NT++DGY R + I E+ME GLKP+
Sbjct: 438 CEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNV 497
Query: 84 VTFNTLINKFCDSGDMDKAEIWLKKMV 4
+++ LIN C ++ +AE+ L MV
Sbjct: 498 ISYGCLINCLCKDANILEAEVILGDMV 524
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/89 (29%), Positives = 50/89 (56%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LC+ +++A+ +L + G VP + T+ DG+ + G++ I++ E+ G++
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKMVQ 1
T + L+N C G+M+KAE LKK ++
Sbjct: 357 DYTCSILLNALCKEGNMEKAEEVLKKFLE 385
>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 100 bits (249), Expect = 1e-19
Identities = 40/89 (44%), Positives = 70/89 (78%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LC+ G+++KAEE+L L+E G+ P+++ +N +++ YC+ GD+ K I E+ME GL+P+
Sbjct: 335 LCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPN 394
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKMVQ 1
+TFNT+I+KFC++G++D AE W+++MV+
Sbjct: 395 RITFNTVISKFCETGEVDHAETWVRRMVE 423
Score = 70.9 bits (172), Expect = 1e-10
Identities = 31/87 (35%), Positives = 56/87 (64%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK ++ A ++ + +++R +VP V +NT++DGYC+VG I + + E+M+ ++ +
Sbjct: 202 LCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECN 261
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKM 7
VT+N+L+N C SG +D A L +M
Sbjct: 262 LVTYNSLLNGLCGSGRVDDAREVLLEM 288
Score = 61.6 bits (148), Expect = 6e-08
Identities = 27/87 (31%), Positives = 52/87 (59%)
Frame = -2
Query: 264 CKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPSC 85
C+ G+VD AE + ++E+G+ PT +N++++GY + G + ++M+ G+KP+
Sbjct: 406 CETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNV 465
Query: 84 VTFNTLINKFCDSGDMDKAEIWLKKMV 4
+++ +LIN C + AEI L M+
Sbjct: 466 ISYGSLINCLCKDRKLIDAEIVLADMI 492
>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product
[Arabidopsis thaliana] gi|28973713|gb|AAO64173.1|
unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis
thaliana] gi|110737169|dbj|BAF00534.1| hypothetical
protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 95.9 bits (237), Expect = 3e-18
Identities = 45/87 (51%), Positives = 60/87 (68%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCK GK++KAEEIL M +GLVP EVI+NT++DGYCR GD+ E ME G+KP
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKM 7
+ +N LI +FC+ G+M+ AE + KM
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKM 450
Score = 73.6 bits (179), Expect = 2e-11
Identities = 32/87 (36%), Positives = 59/87 (67%)
Frame = -2
Query: 267 LCKGGKVDKAEEILNALMERGLVPTEVIFNTILDGYCRVGDIAKLISIFEKMEFYGLKPS 88
LCKG +++ AE++ + ++ R L+P+ + +NT++DGYC+ G+ K + E+M+ ++PS
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 87 CVTFNTLINKFCDSGDMDKAEIWLKKM 7
+TFNTL+ +G ++ AE LK+M
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEM 310