BLASTX nr result

ID: Angelica23_contig00036269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036269
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CBI24302.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_003541737.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]   137   7e-31

>ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform 1 [Cucumis sativus]
           gi|449442523|ref|XP_004139031.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like isoform 2 [Cucumis sativus]
          Length = 517

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/108 (64%), Positives = 91/108 (84%)
 Frame = -3

Query: 324 FVQRGFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLV 145
           + Q G  E AVR+FQ MV  GE  PNEAT+V++LSACSSI  L+LGQWVHSY++SR D++
Sbjct: 237 YAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVI 296

Query: 144 MNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
           ++ NVGNAL+N+YVKCGNM++AI +F+ I+ KD+VSWST+ISGLAMNG
Sbjct: 297 IDGNVGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNG 344



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/104 (39%), Positives = 59/104 (56%)
 Frame = -3

Query: 312 GFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLVMNRN 133
           GF + A+  F  M     V PN  T+V+ LSACSS+  L LG+ +H  +  R     N  
Sbjct: 143 GFEKEALSKFLSM----NVRPNSTTLVTALSACSSLRCLKLGKAIHG-LRMRTLNEENVI 197

Query: 132 VGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
           + NAL++ YV+C  +  A  +F  +  +DVVSW+TMI G A +G
Sbjct: 198 LENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSG 241


>ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like, partial [Cucumis sativus]
          Length = 472

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/108 (63%), Positives = 90/108 (83%)
 Frame = -3

Query: 324 FVQRGFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLV 145
           + Q G  E AVR+FQ MV  GE  PNEAT+V++LSACSSI  L+LGQWVHSY++SR D++
Sbjct: 192 YAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVI 251

Query: 144 MNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
           ++ NVGNAL+N+YVKCGNM++AI +F+  + KD+VSWST+ISGLAMNG
Sbjct: 252 IDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNG 299



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/104 (38%), Positives = 58/104 (55%)
 Frame = -3

Query: 312 GFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLVMNRN 133
           GF + A+  F  M     V PN  T+V+ LS CSS+  L LG+ +H  +  R     N  
Sbjct: 98  GFEKEALSKFLSM----NVRPNSTTLVTALSTCSSLRCLKLGKAIHG-LRMRTLNEENVI 152

Query: 132 VGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
           + NAL++ YV+C  +  A  +F  +  +DVVSW+TMI G A +G
Sbjct: 153 LENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSG 196


>emb|CBI24302.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/106 (59%), Positives = 85/106 (80%)
 Frame = -3

Query: 318 QRGFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLVMN 139
           Q G  E AV +FQ MV+GGE  PNE T+V++L+ACSS+  LNLG+WVHSY+S+R DLV++
Sbjct: 252 QGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLGRWVHSYISTRYDLVVD 311

Query: 138 RNVGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
            NVGNAL+N+Y KC +M +A+RVF  +  KD++SWST+I G+AMNG
Sbjct: 312 GNVGNALINMYAKCSDMYMAVRVFNELTHKDMISWSTIIGGMAMNG 357



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/104 (39%), Positives = 62/104 (59%)
 Frame = -3

Query: 312 GFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLVMNRN 133
           GF E A+  F  M    +V+PN +T+VS++SAC  +  +  G+ +H Y S R     N  
Sbjct: 156 GFDEEAIGEFLSM----DVKPNTSTLVSVVSACCGLRAVRFGKAIHGY-SLRSMDGDNII 210

Query: 132 VGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
           + NAL++ YVKCG +  A  +F  +  +DV+SW+TM+ GLA  G
Sbjct: 211 LDNALLDFYVKCGYLVSAKYLFMKMFRRDVISWTTMVGGLAQGG 254


>ref|XP_003541737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 293

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/104 (61%), Positives = 81/104 (77%)
 Frame = -3

Query: 312 GFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLVMNRN 133
           G+ E A  +F+ MV   E EPNEAT+V++LSAC+SIG L+LGQWVHSY+ SR DLV++ N
Sbjct: 12  GYCEEAFAVFKRMVLSEEAEPNEATIVTVLSACASIGTLSLGQWVHSYIDSRHDLVVDEN 71

Query: 132 VGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
           +GNAL+N+YVKCG+M +  RVF  I  KDV+SW T I GLAMNG
Sbjct: 72  IGNALLNMYVKCGDMQMGFRVFDMIVHKDVISWGTFICGLAMNG 115


>emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]
          Length = 725

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/106 (59%), Positives = 84/106 (79%)
 Frame = -3

Query: 318 QRGFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLVMN 139
           Q G  E AV +FQ MV+GGE  PNE T+V++L+ACSS+  LNLG+WVHSY+S R DLV++
Sbjct: 186 QGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLGRWVHSYISIRYDLVVD 245

Query: 138 RNVGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
            NVGNAL+N+Y KC +M +A+RVF  +  KD++SWST+I G+AMNG
Sbjct: 246 GNVGNALINMYAKCSDMYMAVRVFNELTHKDMISWSTIIGGMAMNG 291



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/104 (39%), Positives = 62/104 (59%)
 Frame = -3

Query: 312 GFFEVAVRMFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGQWVHSYVSSRDDLVMNRN 133
           GF E A+  F  M    +V+PN +T+VS++SAC  +  +  G+ +H Y S R     N  
Sbjct: 90  GFDEEAIGEFLSM----DVKPNTSTLVSVVSACCGLRAVRFGKAIHGY-SLRSMDGDNII 144

Query: 132 VGNALVNLYVKCGNMDLAIRVFRGIKFKDVVSWSTMISGLAMNG 1
           + NAL++ YVKCG +  A  +F  +  +DV+SW+TM+ GLA  G
Sbjct: 145 LDNALLDFYVKCGYLVSAKYLFMKMFRRDVISWTTMVGGLAQGG 188


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