BLASTX nr result

ID: Angelica23_contig00036260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036260
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing pr...    74   2e-11
ref|XP_003530338.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    72   6e-11
ref|XP_003532945.1| PREDICTED: ribosomal L1 domain-containing pr...    71   8e-11
emb|CBI31756.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1...    70   2e-10

>ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
           max]
          Length = 408

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
 Frame = +3

Query: 108 TVQKAIKALLQWKKSQ----KPQSLTDPQSPLDEDFIYLLVTLKKIPRKDHRTSFKIPLV 275
           TV KA+ ALLQW++SQ    KP+ L +     DE+F+YL++TLKKIP K      KIPL 
Sbjct: 10  TVSKAVDALLQWRRSQSEIQKPKLLGE-----DEEFVYLILTLKKIPSKSRVNPHKIPLP 64

Query: 276 HPLQDSLVFKEVCLIIDDRPKK 341
           H L     F E CLI+DDRP K
Sbjct: 65  HSLISP--FSEQCLILDDRPNK 84


>ref|XP_003530338.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosome biogenesis
           protein C8F11.04-like [Glycine max]
          Length = 210

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
 Frame = +3

Query: 108 TVQKAIKALLQWKKSQ----KPQSLTDPQSPLDEDFIYLLVTLKKIPRKDHRTSFKIPLV 275
           TV KA+ ALL+W++SQ    KP+ L +     DE+F+YL++TLKKIP K      KIPL+
Sbjct: 16  TVSKAVDALLKWRRSQLEIQKPKLLDE-----DEEFVYLILTLKKIPSKSXVNPHKIPLL 70

Query: 276 HPLQDSLVFKEVCLIIDDRPKK 341
           H       F E CLI+DDRP K
Sbjct: 71  HSFISP--FSEQCLILDDRPNK 90


>ref|XP_003532945.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
           max]
          Length = 407

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/79 (48%), Positives = 51/79 (64%)
 Frame = +3

Query: 105 NTVQKAIKALLQWKKSQKPQSLTDPQSPLDEDFIYLLVTLKKIPRKDHRTSFKIPLVHPL 284
           +TV KA+ ALL+W++SQ  ++L       DE+++YL++TLKKIP K      KIPL H L
Sbjct: 9   DTVSKAVDALLKWRRSQS-ETLKPKLFDEDEEYVYLILTLKKIPSKSRVNPHKIPLPHSL 67

Query: 285 QDSLVFKEVCLIIDDRPKK 341
                F E CLI+DDRP K
Sbjct: 68  FSP--FSEQCLILDDRPNK 84


>emb|CBI31756.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
 Frame = +3

Query: 57  SPSSTTTIFKKPILDLNTVQKAIKALLQWKKS----QKPQSLTDPQSPLDED-FIYLLVT 221
           S S  +++   P +   T++KA  ALL+W+ S    QKPQ L       DED FIYL++T
Sbjct: 10  SASLFSSMASPPAVAAETIEKATTALLKWQASKSNGQKPQLLNQ-----DEDRFIYLILT 64

Query: 222 LKKIPRKDHRTSFKIPLVHPLQDSLVFKEVCLIIDDRP 335
           LKKIP K      KIPL HPL  +    E+CLI+DDRP
Sbjct: 65  LKKIPPKGRTNPHKIPLPHPLH-TPPNSELCLIVDDRP 101


>ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing
           protein 1-like [Cucumis sativus]
          Length = 364

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/79 (48%), Positives = 50/79 (63%)
 Frame = +3

Query: 108 TVQKAIKALLQWKKSQKPQSLTDPQSPLDEDFIYLLVTLKKIPRKDHRTSFKIPLVHPLQ 287
           T  KA+++LLQW+ S++ +    PQ    EDF+YL+VTLKKIP K     +KIPL H L 
Sbjct: 16  TAAKAVESLLQWRNSKREK----PQLFDQEDFLYLIVTLKKIPPKGRTNPYKIPLPHSLH 71

Query: 288 DSLVFKEVCLIIDDRPKKD 344
                 E+CLIIDDR K +
Sbjct: 72  SD--SSELCLIIDDRTKSN 88


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