BLASTX nr result

ID: Angelica23_contig00036233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036233
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB59066.1| pectate lyase [Salix gilgiana]                        281   3e-74
ref|XP_002285340.1| PREDICTED: probable pectate lyase 5 [Vitis v...   278   3e-73
ref|XP_002311747.1| predicted protein [Populus trichocarpa] gi|2...   276   1e-72
gb|ABK94358.1| unknown [Populus trichocarpa]                          276   1e-72
ref|XP_003549833.1| PREDICTED: probable pectate lyase 22 isoform...   276   2e-72

>dbj|BAB59066.1| pectate lyase [Salix gilgiana]
          Length = 409

 Score =  281 bits (720), Expect = 3e-74
 Identities = 130/141 (92%), Positives = 137/141 (97%)
 Frame = -1

Query: 425 DDDPVNPKPGTLRYAVIQDEPLWIIFKHDMVIKLKEELMMNSFKTIDGRGANVHIAGGPC 246
           DDDPVNPKPGTLRYAVIQDEPLWI+F  DMVIKL+EEL+MNSFKTIDGRGA+VHIAGGPC
Sbjct: 107 DDDPVNPKPGTLRYAVIQDEPLWIVFARDMVIKLREELIMNSFKTIDGRGASVHIAGGPC 166

Query: 245 ITIQYVTNIIIHGLNIHDCKRGGNANVRDSPNHYGWRTVSDGDGVSIFGGSHVWVDHCSL 66
           ITIQYVTNIIIHG+NIHDCKRGGNA+VRDSP+HYGWRTVSDGDGVSIFGGSHVWVDHCSL
Sbjct: 167 ITIQYVTNIIIHGVNIHDCKRGGNAHVRDSPSHYGWRTVSDGDGVSIFGGSHVWVDHCSL 226

Query: 65  SNCRDGLIDAIRGSTAITISN 3
           SNC DGLIDAI GSTAITISN
Sbjct: 227 SNCNDGLIDAIHGSTAITISN 247


>ref|XP_002285340.1| PREDICTED: probable pectate lyase 5 [Vitis vinifera]
           gi|296081403|emb|CBI16836.3| unnamed protein product
           [Vitis vinifera]
          Length = 403

 Score =  278 bits (712), Expect = 3e-73
 Identities = 129/141 (91%), Positives = 136/141 (96%)
 Frame = -1

Query: 425 DDDPVNPKPGTLRYAVIQDEPLWIIFKHDMVIKLKEELMMNSFKTIDGRGANVHIAGGPC 246
           D DPVNPKPGTLRYAVIQ EPLWIIF+ DMVIKLKEEL+MNSFKTIDGRGA+VHIAGGPC
Sbjct: 101 DYDPVNPKPGTLRYAVIQKEPLWIIFQRDMVIKLKEELIMNSFKTIDGRGASVHIAGGPC 160

Query: 245 ITIQYVTNIIIHGLNIHDCKRGGNANVRDSPNHYGWRTVSDGDGVSIFGGSHVWVDHCSL 66
           ITIQYVTNIIIHGLNIHDCK+GGNANVRDSP+HYGWRT+SDGDGVSIFGGSHVWVDHCSL
Sbjct: 161 ITIQYVTNIIIHGLNIHDCKQGGNANVRDSPDHYGWRTISDGDGVSIFGGSHVWVDHCSL 220

Query: 65  SNCRDGLIDAIRGSTAITISN 3
           SNC DGL+DAI GSTAITISN
Sbjct: 221 SNCNDGLVDAIHGSTAITISN 241


>ref|XP_002311747.1| predicted protein [Populus trichocarpa] gi|222851567|gb|EEE89114.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  276 bits (706), Expect = 1e-72
 Identities = 127/141 (90%), Positives = 135/141 (95%)
 Frame = -1

Query: 425 DDDPVNPKPGTLRYAVIQDEPLWIIFKHDMVIKLKEELMMNSFKTIDGRGANVHIAGGPC 246
           +DDPVNPKPGTLRYAVIQ+EPLWIIF  DMVIKLKEEL+MNSFKTIDGRGA+VHIAGGPC
Sbjct: 100 NDDPVNPKPGTLRYAVIQEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPC 159

Query: 245 ITIQYVTNIIIHGLNIHDCKRGGNANVRDSPNHYGWRTVSDGDGVSIFGGSHVWVDHCSL 66
           IT+QYVTNIIIHG+NIHDCK+GGNA VRDSP HYGWRT+SDGDGVSIFGGSHVWVDHCSL
Sbjct: 160 ITVQYVTNIIIHGINIHDCKQGGNAYVRDSPGHYGWRTISDGDGVSIFGGSHVWVDHCSL 219

Query: 65  SNCRDGLIDAIRGSTAITISN 3
           SNC DGLIDAI GSTAITISN
Sbjct: 220 SNCNDGLIDAIHGSTAITISN 240


>gb|ABK94358.1| unknown [Populus trichocarpa]
          Length = 402

 Score =  276 bits (706), Expect = 1e-72
 Identities = 127/141 (90%), Positives = 135/141 (95%)
 Frame = -1

Query: 425 DDDPVNPKPGTLRYAVIQDEPLWIIFKHDMVIKLKEELMMNSFKTIDGRGANVHIAGGPC 246
           +DDPVNPKPGTLRYAVIQ+EPLWIIF  DMVIKLKEEL+MNSFKTIDGRGA+VHIAGGPC
Sbjct: 100 NDDPVNPKPGTLRYAVIQEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPC 159

Query: 245 ITIQYVTNIIIHGLNIHDCKRGGNANVRDSPNHYGWRTVSDGDGVSIFGGSHVWVDHCSL 66
           IT+QYVTNIIIHG+NIHDCK+GGNA VRDSP HYGWRT+SDGDGVSIFGGSHVWVDHCSL
Sbjct: 160 ITVQYVTNIIIHGINIHDCKQGGNAYVRDSPGHYGWRTISDGDGVSIFGGSHVWVDHCSL 219

Query: 65  SNCRDGLIDAIRGSTAITISN 3
           SNC DGLIDAI GSTAITISN
Sbjct: 220 SNCNDGLIDAIHGSTAITISN 240


>ref|XP_003549833.1| PREDICTED: probable pectate lyase 22 isoform 2 [Glycine max]
          Length = 384

 Score =  276 bits (705), Expect = 2e-72
 Identities = 127/141 (90%), Positives = 133/141 (94%)
 Frame = -1

Query: 425 DDDPVNPKPGTLRYAVIQDEPLWIIFKHDMVIKLKEELMMNSFKTIDGRGANVHIAGGPC 246
           DDDPV PKPGTLRYAVIQDEPLWIIF  DMVIKLKEEL+MNSFKTIDGRGA+VHIAGGPC
Sbjct: 82  DDDPVTPKPGTLRYAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPC 141

Query: 245 ITIQYVTNIIIHGLNIHDCKRGGNANVRDSPNHYGWRTVSDGDGVSIFGGSHVWVDHCSL 66
           ITIQYVTN+IIHG+NIHDCK+GGNA VRDSP HYGWRT+SDGDGVSIFGGSHVWVDHCSL
Sbjct: 142 ITIQYVTNVIIHGINIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHCSL 201

Query: 65  SNCRDGLIDAIRGSTAITISN 3
           SNC DGLIDAI GST ITISN
Sbjct: 202 SNCNDGLIDAIHGSTGITISN 222


Top