BLASTX nr result

ID: Angelica23_contig00036121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036121
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...    87   1e-15
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...    82   4e-14
emb|CBI21412.3| unnamed protein product [Vitis vinifera]               82   4e-14
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...    79   5e-13
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...    79   5e-13

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = +1

Query: 118 MGKQRLSNMFTSSVFKKREEKGKSLLSDSIVDDVIAEFAPDEGDRERRRKEHSNLVKC-- 291
           MGKQR+S++FTSSVFK R++K ++L  DSIVDDVIAEFAPDE DRERRR+ +SN ++   
Sbjct: 141 MGKQRISSLFTSSVFK-RDDKTRNLSCDSIVDDVIAEFAPDEADRERRRRGNSNSLQASR 199

Query: 292 ---MNP-IVKVKSEILGSNGGDSRLRSEISFDAGMNCENL 399
               NP ++ VK+E LG+   D   R E+      N E++
Sbjct: 200 SSVANPNLLNVKTEKLGAGKVDLMTRQEVKRVTAQNGESI 239


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/57 (77%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +1

Query: 118 MGKQRLSNMFTSSVFKK-REEKGKSLLSDSIVDDVIAEFAPDEGDRERRRKEHSNLV 285
           MGKQRLS+MFTSSVFKK R++K K L  DSIVDDVIAEFAPDE DRERRR+  S LV
Sbjct: 137 MGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRRRGQSGLV 193


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/57 (77%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +1

Query: 118 MGKQRLSNMFTSSVFKK-REEKGKSLLSDSIVDDVIAEFAPDEGDRERRRKEHSNLV 285
           MGKQRLS+MFTSSVFKK R++K K L  DSIVDDVIAEFAPDE DRERRR+  S LV
Sbjct: 137 MGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRRRGQSGLV 193


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
 Frame = +1

Query: 118 MGKQRLSNMFTSSVFKK--REEKGKSLLSDSIVDDVIAEFAPDEGDRERRRKEHSN---L 282
           MGKQ+LS+MFTSS+F+K  R++K K L  DSIVDDVIAEFAPDE DRERRRK       +
Sbjct: 138 MGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIVDDVIAEFAPDETDRERRRKGQIGAIPI 197

Query: 283 VKCMNPIVKVKSEILGSNGGDSRLRSEISFDA 378
           ++ +  +  VKSE   + G +    S+   DA
Sbjct: 198 LRTVTSVPAVKSEGFTARGLNLTGESDFIKDA 229


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
 Frame = +1

Query: 118 MGKQRLSNMFTSSVFKK--REEKGKSLLSDSIVDDVIAEFAPDEGDRERRRKEHSN---L 282
           MGKQ+LS+MFTSS+F+K  R++K K L  DSIVDDVIAEFAPDE DRERRRK       +
Sbjct: 138 MGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIVDDVIAEFAPDETDRERRRKGQIGAIPI 197

Query: 283 VKCMNPIVKVKSEILGSNGGDSRLRSEISFDA 378
           ++ +  +  VKSE   + G +    S+   DA
Sbjct: 198 LRTVTSVPAVKSEGFTARGLNLTGESDFIKDA 229


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