BLASTX nr result

ID: Angelica23_contig00036057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036057
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263...    72   7e-11
ref|XP_002878180.1| predicted protein [Arabidopsis lyrata subsp....    65   5e-09
ref|NP_191357.1| DNA-binding bromodomain-containing protein [Ara...    58   1e-06

>ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263099 [Vitis vinifera]
           gi|147768907|emb|CAN75881.1| hypothetical protein
           VITISV_024454 [Vitis vinifera]
          Length = 686

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
 Frame = +3

Query: 255 KLGEIESSDVQSTTS--RLRKEENQKLCFGSGVGDGRENEFL--LLKEMSSVSQPLVEFL 422
           K G  ESSDVQS+ S  R RK   +K   GS  GD  E E +    K +   SQPLV FL
Sbjct: 285 KDGTKESSDVQSSASLTRKRKRRRKKEISGSSSGDEPETEAVSPATKRICVKSQPLVSFL 344

Query: 423 ETLQSYKLSLVSDRLLDSQETSNYRNLIRQHIDIKS 530
           E ++S+K S + +R L++QET  Y++++RQH+D++S
Sbjct: 345 EIIRSHKHSSLFERRLETQETEVYKSIVRQHVDLES 380


>ref|XP_002878180.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324018|gb|EFH54439.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 629

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 47/142 (33%), Positives = 69/142 (48%)
 Frame = +3

Query: 102 RPENDTVRTESCNGSTDSVTKEMGKMAMVKRXXXXXXXXXXXXXXMVVESKKLGEIESSD 281
           R +   VR +S  GS +SV KE  +    +                  E +K    E+SD
Sbjct: 183 RIDEKPVREDSGRGSCESVAKESDRAEPEREGNDSPEFVESMDESKGEEDRK----ETSD 238

Query: 282 VQSTTSRLRKEENQKLCFGSGVGDGRENEFLLLKEMSSVSQPLVEFLETLQSYKLSLVSD 461
            QS+ S  RKE   +         G E++ L + ++ + SQPL++F+E LQS+ +     
Sbjct: 239 GQSSASLPRKETVDQH------QPGNEDQSLTVNKIPAESQPLIDFIEILQSHPIGSHFS 292

Query: 462 RLLDSQETSNYRNLIRQHIDIK 527
           R L SQETS Y  +IRQHID +
Sbjct: 293 RRLQSQETSEYDRIIRQHIDFE 314


>ref|NP_191357.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
           gi|6729541|emb|CAB67626.1| putative protein [Arabidopsis
           thaliana] gi|332646205|gb|AEE79726.1| DNA-binding
           bromodomain-containing protein [Arabidopsis thaliana]
          Length = 632

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3   GVKNGSSEVKLEEYLPEKVVQEEVGGKGQNLEVRPENDTVRTESCNGSTDSVTKEMGKMA 182
           G +N +  VK+ E + E+     +GG+        +    R +S  GS +SV KE  +  
Sbjct: 161 GSENTNRAVKIAEPVDEE--PNRIGGEDN------DEKPAREDSGRGSCESVAKESDRAE 212

Query: 183 MVKRXXXXXXXXXXXXXXMVVESKKLGEIESSDVQSTTSRLRKEENQKLCFGSGVGDGRE 362
             +                  E  K    E+SD QS+ S  RKE   +        D  +
Sbjct: 213 PKREGNDSPELVESMDESKGEEDTK----ETSDGQSSASFPRKETVDQ--------DQPD 260

Query: 363 N--EFLLLKEMSSVSQPLVEFLETLQSYKLSLVSDRLLDSQETSNYRNLIRQHIDIK 527
           N  + L + ++   SQPL +F+E LQS+ +     R L++QETS+Y  +IRQHID +
Sbjct: 261 NKDQSLTVNKIFVESQPLSDFIEILQSHPIGSHFSRRLETQETSDYYRIIRQHIDFE 317


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