BLASTX nr result

ID: Angelica23_contig00036016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00036016
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...    84   2e-14
emb|CBI35789.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_002883101.1| pentatricopeptide repeat-containing protein ...    74   1e-11

>ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|222869094|gb|EEF06225.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = -2

Query: 175 INTTTYWTKKIHDLCTTQNNVDAALGLVDHLRLQNYHPNSLNLSSIIHALCHANRFSE 2
           I   +YWT+KIHDLCT   NVD AL L+DHLRL+ Y P+SLNLSSIIH LC ANRF+E
Sbjct: 46  ITNRSYWTQKIHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNE 103


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/58 (67%), Positives = 43/58 (74%)
 Frame = -2

Query: 175 INTTTYWTKKIHDLCTTQNNVDAALGLVDHLRLQNYHPNSLNLSSIIHALCHANRFSE 2
           I  ++YWTKKIH LCT Q  VD AL L+DHLRL  Y P+SLN SSIIHALC A RF E
Sbjct: 54  ITNSSYWTKKIHLLCTQQRKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKE 111


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = -2

Query: 160 YWTKKIHDLCTTQNNVDAALGLVDHLRLQNYHPNSLNLSSIIHALCHANRFSE 2
           +W++KIH+LCT   NVD AL L+D LRL+ Y P+SLNLSSIIHALC ANRFSE
Sbjct: 294 FWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSE 346


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = -2

Query: 160 YWTKKIHDLCTTQNNVDAALGLVDHLRLQNYHPNSLNLSSIIHALCHANRFSE 2
           +W++KIH+LCT   NVD AL L+D LRL+ Y P+SLNLSSIIHALC ANRFSE
Sbjct: 62  FWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSE 114


>ref|XP_002883101.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328941|gb|EFH59360.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = -2

Query: 307 RTRARTLHNMFL-SKSQSLKTTTILNPKXXXXXXXXXXXXXXXXLINTTTYWTKKIHDLC 131
           R R R   N FL SKS S  + +IL                    +    YW ++IH +C
Sbjct: 6   RLRLRARENGFLLSKSLSFSSASILKSDDVEGEDDAVEAEDRRRSVTNRAYWRRRIHSIC 65

Query: 130 TTQNNVDAALGLVDHLRLQNYHPNSLNLSSIIHALCHANRFSE 2
             + N D AL ++D L L+ Y P+SLNLSS+IH+LC A RF E
Sbjct: 66  AVRRNPDEALRVLDGLCLRGYRPDSLNLSSVIHSLCDAGRFDE 108


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