BLASTX nr result

ID: Angelica23_contig00035878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035878
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263205.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...    54   1e-08
ref|XP_002301666.1| predicted protein [Populus trichocarpa] gi|2...    52   1e-06

>ref|XP_002263205.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1 [Vitis
           vinifera] gi|147772045|emb|CAN73422.1| hypothetical
           protein VITISV_032904 [Vitis vinifera]
           gi|296087078|emb|CBI33452.3| unnamed protein product
           [Vitis vinifera]
          Length = 683

 Score = 54.3 bits (129), Expect(2) = 1e-08
 Identities = 34/97 (35%), Positives = 47/97 (48%)
 Frame = -2

Query: 455 MRDTYHFMDRITITELEGETRLDGAGWRDSIVYSGLPSRATNEPEFELGFKAIDFAFENE 276
           +RDTY  M+++ +TE+E     D  G  D  V  G     T E   E+  +      E E
Sbjct: 545 LRDTYCIMEQVVVTEIE-----DMEGMTDEEVLFG-----TIESGSEVWMRGTGMDLEAE 594

Query: 275 FMYNGGKDRVIVKCKCGANDFDGEKMTDRVCRM*DLW 165
             Y GG D   V C+CGA D DGE+M    C + ++W
Sbjct: 595 LKYEGGSDNWRVSCECGALDDDGERMV--ACDICEVW 629



 Score = 30.0 bits (66), Expect(2) = 1e-08
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -1

Query: 552 EKFTRGFPPGEHIVLYE*CTVGEFK 478
           E FTR  PPGE IV+    TVGE K
Sbjct: 514 EIFTRELPPGEFIVVPPYATVGELK 538


>ref|XP_002301666.1| predicted protein [Populus trichocarpa] gi|222843392|gb|EEE80939.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 51.6 bits (122), Expect(2) = 1e-06
 Identities = 30/100 (30%), Positives = 46/100 (46%)
 Frame = -2

Query: 464 QCGMRDTYHFMDRITITELEGETRLDGAGWRDSIVYSGLPSRATNEPEFELGFKAIDFAF 285
           +  +RDTY  ++R  + E+E    LD        V SG           E+  K      
Sbjct: 476 ESALRDTYCMLERFVVIEIEHMENLDDKDLLCKFVESGA----------EIFVKGYGMDI 525

Query: 284 ENEFMYNGGKDRVIVKCKCGANDFDGEKMTDRVCRM*DLW 165
            ++  Y GG D   V+C+CGA D DGE+M +  C + ++W
Sbjct: 526 NSQLRYEGGSDNWKVRCECGACDDDGERMVE--CDICEVW 563



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -1

Query: 561 ELQEKFTRGFPPGEHIVLYE*CTVGEFKIYARPVWNEGY 445
           +L+ KF R  PPGE IVL    +V E K  A     + Y
Sbjct: 445 DLEAKFHRKAPPGEIIVLPLHASVLELKQEAESALRDTY 483


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