BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035877
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    87   2e-16
emb|CAA73803.1| reverse transcriptase [Allium cepa]                    82   4e-15
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    81   1e-13
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    81   1e-13
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    77   1e-13

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 87.4 bits (215), Expect(2) = 2e-16
 Identities = 38/75 (50%), Positives = 55/75 (73%)
 Frame = -3

Query: 248  DFRPISCCNVAYKCVAKMLADRLKCVLPELISPVQNAFIPNRSIEDNILIAQDLSCGYHL 69
            D+RPISCCNV YK ++K+LA+RLKC+LPE I+P Q+AFI +R + +N+L+A +L   YH 
Sbjct: 794  DYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHK 853

Query: 68   DNGTPSCTINLTSMK 24
            D  +P C + +   K
Sbjct: 854  DGLSPRCAMKIDLSK 868



 Score = 22.7 bits (47), Expect(2) = 2e-16
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 42  KLDIHEAFDSLNW 4
           K+D+ +AFDS+ W
Sbjct: 863 KIDLSKAFDSVQW 875


>emb|CAA73803.1| reverse transcriptase [Allium cepa]
          Length = 137

 Score = 82.0 bits (201), Expect(2) = 4e-15
 Identities = 38/76 (50%), Positives = 52/76 (68%)
 Frame = -3

Query: 251 TDFRPISCCNVAYKCVAKMLADRLKCVLPELISPVQNAFIPNRSIEDNILIAQDLSCGYH 72
           T FRPISCCN  YKC++K+LA RLK VLP L+SP Q A++  R+I D++L++ +L  GY 
Sbjct: 1   TKFRPISCCNTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYK 60

Query: 71  LDNGTPSCTINLTSMK 24
             + TP   + L  MK
Sbjct: 61  RKSATPRAMLKLDIMK 76



 Score = 23.9 bits (50), Expect(2) = 4e-15
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 42  KLDIHEAFDSLNW 4
           KLDI +AFD+L W
Sbjct: 71  KLDIMKAFDTLQW 83


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = -3

Query: 257 RVTDFRPISCCNVAYKCVAKMLADRLKCVLPELISPVQNAFIPNRSIEDNILIAQD 90
           RVT FRPIS CNV YK ++KMLA+RLKC+LPE+IS  Q+AF+P R I DN+L+A +
Sbjct: 363 RVTQFRPISLCNVVYKIISKMLANRLKCLLPEIISDQQSAFVPGRLITDNVLVAYE 418


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = -3

Query: 257 RVTDFRPISCCNVAYKCVAKMLADRLKCVLPELISPVQNAFIPNRSIEDNILIAQD 90
           RVT FRPIS CNV YK ++KMLA+RLKC+LPE+IS  Q+AF+P R I DN+L+A +
Sbjct: 363 RVTQFRPISLCNVVYKIISKMLANRLKCLLPEIISDQQSAFVPGRLITDNVLVAYE 418


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 76.6 bits (187), Expect(2) = 1e-13
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = -3

Query: 248  DFRPISCCNVAYKCVAKMLADRLKCVLPELISPVQNAFIPNRSIEDNILIAQDLSCGYHL 69
            D+RPISCCNV YK ++K+LA+RLK +LP  I   Q+AF+  R + +N+L+A +L   YH 
Sbjct: 825  DYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHK 884

Query: 68   DNGTPSCTINLTSMK 24
            ++ TP C + +   K
Sbjct: 885  ESVTPRCAMKIDISK 899



 Score = 24.3 bits (51), Expect(2) = 1e-13
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 42  KLDIHEAFDSLNWE 1
           K+DI +AFDS+ W+
Sbjct: 894 KIDISKAFDSVQWQ 907