BLASTX nr result

ID: Angelica23_contig00035858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035858
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002513614.1| conserved hypothetical protein [Ricinus comm...   114   8e-24
emb|CBI22579.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...   107   1e-21
ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ...   107   1e-21

>ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|222875069|gb|EEF12200.1|
            predicted protein [Populus trichocarpa]
          Length = 1341

 Score =  119 bits (298), Expect = 3e-25
 Identities = 65/120 (54%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
 Frame = -3

Query: 361  AFSEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKKSS 182
            AF+++QE MIK LFEQFKDH+RCS+MIANA+ +D SFTAAQ+SRKLKQLGLR P+ K+S 
Sbjct: 1046 AFNKDQEEMIKALFEQFKDHRRCSYMIANAMGSDNSFTAAQVSRKLKQLGLRAPRQKQSE 1105

Query: 181  SHLHLRDEEPEDMYDEGFD-DADTLSSLRKRSRTKLNANNVA-ERPVQKIVEKVSEEDSD 8
            + +HLRDEE       G D D +TL SL+ RS+ K +      E P Q I  + S+ D +
Sbjct: 1106 TDMHLRDEELNSFSVGGQDSDDETLLSLKNRSKNKDDGGLFGDELPSQNIEGESSDSDDE 1165



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = -3

Query: 355  SEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKKSSSH 176
            ++E E  IK L+E+FKD + CS +IA +LD DG  + AQ+  KLKQLGL+V   K+  S 
Sbjct: 942  TDEMEMKIKDLYEKFKDDENCSHLIAESLDPDGQVSRAQVINKLKQLGLKVASKKRKRSV 1001

Query: 175  LHLRDEEPEDMYDEG 131
                   P+ + + G
Sbjct: 1002 GRPFSTNPDQLGENG 1016


>ref|XP_002513614.1| conserved hypothetical protein [Ricinus communis]
            gi|223547522|gb|EEF49017.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1047

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/91 (63%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = -3

Query: 361  AFSEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKKSS 182
            AFS++QE +I+ LFEQFK+HKRCS+MIANAL AD SFTAAQ+SRKLKQLGL +P+ ++S 
Sbjct: 929  AFSKDQEEIIRALFEQFKEHKRCSYMIANALAADNSFTAAQVSRKLKQLGLHIPRQRRSE 988

Query: 181  SHLHLRDEEPEDM-YDEGFDDADTLSSLRKR 92
            + LHLRD+E  D    E   D +TL SLRKR
Sbjct: 989  TKLHLRDKELNDFSVGEQVSDDETLLSLRKR 1019


>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
          Length = 1217

 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
 Frame = -3

Query: 361  AFSEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKKSS 182
            AFS++QE  I+ L+EQFK HKRC++MIA+AL  D   TAAQ+SRKLKQLGL VP+ K++ 
Sbjct: 1019 AFSKDQEETIRALYEQFKGHKRCTYMIASALAGDDILTAAQVSRKLKQLGLHVPRRKRAE 1078

Query: 181  SHLHLRDEEPEDMYDEGFDDAD--TLSSLRKRSRTKLNANNVAERPVQKIVEKVSEEDSD 8
             ++HLRDE+  D       D+D  TL SLRKRS+ + +     E P Q I  K+ +   D
Sbjct: 1079 GNMHLRDEDLNDFDTAKAQDSDDETLLSLRKRSKKENHRLLREEVPEQNIEGKLMQSSDD 1138



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -3

Query: 355  SEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKK 188
            S E E  IK L+E+FKD + CS +IA ALD D   +  Q+S KLKQLGL++  PKK
Sbjct: 912  SAEVEKNIKDLYEKFKDDRHCSRLIAEALDPDCKVSPVQVSNKLKQLGLKI-APKK 966


>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
 Frame = -3

Query: 361  AFSEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKKSS 182
            AFS++QE  I+ L+EQFK HKRC++MIA+AL  D   TAAQ+SRKLKQLGL VP+ K++ 
Sbjct: 1010 AFSKDQEETIRALYEQFKGHKRCTYMIASALAGDDILTAAQVSRKLKQLGLHVPRRKRAE 1069

Query: 181  SHLHLRDEEPEDMYDEGFDDAD--TLSSLRKRSRTKLNANNVAERPVQKIVEKVSEEDSD 8
             ++HLRDE+  D       D+D  TL SLRKRS+ + +     E P Q I  K+ +   D
Sbjct: 1070 GNMHLRDEDLNDFDTAKAQDSDDETLLSLRKRSKKENHRLLREEVPEQNIEGKLMQSSDD 1129



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -3

Query: 355  SEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKK 188
            S E E  IK L+E+FKD + CS +IA ALD D   +  Q+S KLKQLGL++  PKK
Sbjct: 903  SAEVEKNIKDLYEKFKDDRHCSRLIAEALDPDCKVSPVQVSNKLKQLGLKI-APKK 957


>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
            gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
            factor [Medicago truncatula]
          Length = 1335

 Score =  107 bits (267), Expect = 1e-21
 Identities = 63/126 (50%), Positives = 81/126 (64%), Gaps = 6/126 (4%)
 Frame = -3

Query: 361  AFSEEQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPK-KS 185
            AF+E+QE  IK LFE FKDH+RCS+MIANALD DG FT AQ+SRKLKQLGL VPQ   + 
Sbjct: 1045 AFNEDQEARIKVLFEDFKDHRRCSYMIANALDKDGKFTPAQVSRKLKQLGLCVPQKSFRG 1104

Query: 184  SSHLHLRDEEPEDMYDEGFD-----DADTLSSLRKRSRTKLNANNVAERPVQKIVEKVSE 20
             +H     ++ ED+ D   D     D DTL SL KR + K    +  +   Q   +K+S+
Sbjct: 1105 KNH-----QKGEDLMDGSNDRMHESDEDTLISLVKRKKGKNRKESSEQLREQTNEDKLSK 1159

Query: 19   EDSDNE 2
            +DSD+E
Sbjct: 1160 DDSDDE 1165



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/54 (53%), Positives = 35/54 (64%)
 Frame = -3

Query: 349  EQEGMIKGLFEQFKDHKRCSFMIANALDADGSFTAAQISRKLKQLGLRVPQPKK 188
            E E  IK L+E+FKD + CS  IA  LD DG  + AQIS KLK+LGL +   KK
Sbjct: 946  ELEIQIKDLYEKFKDDRNCSRRIAEVLDPDGKISTAQISSKLKKLGLTIASRKK 999


Top