BLASTX nr result

ID: Angelica23_contig00035757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035757
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   101   5e-20
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...    92   3e-17
ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like...    88   6e-16
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...    86   2e-15
ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15

>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  101 bits (252), Expect = 5e-20
 Identities = 52/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
 Frame = +1

Query: 7   CSTVSEVKMGPKKQVP-DHTQDSIVNDVRRTLFETVSSFSEDLEDKANFAELCKLHLMGL 183
           C   SE+    K+Q P DHTQD +V +VRR LFET+SSF   LE + + + L +     L
Sbjct: 266 CLGSSELDSRQKRQYPTDHTQDFVVREVRRVLFETISSFPGSLEKEKDLSRLIETQFTAL 325

Query: 184 HKAFQVVPGTGEDADHIVGRKLLNLYRTGRLGHYTLDRLPSN 309
            +AF+V   +GED ++ V  KLLNLYRTGRLGHYTLD +P N
Sbjct: 326 REAFRVASESGEDVENKVAAKLLNLYRTGRLGHYTLDSVPRN 367


>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 61/100 (61%)
 Frame = +1

Query: 4   KCSTVSEVKMGPKKQVPDHTQDSIVNDVRRTLFETVSSFSEDLEDKANFAELCKLHLMGL 183
           +CST S ++   ++   DHTQD  VN+VRR LFET SSF  +LED+     L +  L  L
Sbjct: 262 ECSTPSNLEKQRRRYPSDHTQDITVNEVRRALFETRSSFDGNLEDEKEMGSLIETQLHTL 321

Query: 184 HKAFQVVPGTGEDADHIVGRKLLNLYRTGRLGHYTLDRLP 303
           HKA  V      +A   V  KLLNLYRTGRLG YTLD LP
Sbjct: 322 HKALHVPMDFCNNATIKVAAKLLNLYRTGRLGRYTLDSLP 361


>ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like [Glycine max]
          Length = 399

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +1

Query: 13  TVSEVKMGPKKQVP-DHTQDSIVNDVRRTLFETVSSFSEDLEDKANFAELCKLHLMGLHK 189
           T S + M  K Q+P DHTQD +V DVRRTLFET+SSF  D+  +     L       L +
Sbjct: 297 TSSGLHMKHKNQIPTDHTQDCVVQDVRRTLFETISSFEGDVRCEDEMEALIARQFTALQE 356

Query: 190 AFQV-VPGTGEDADHIVGRKLLNLYRTGRLGHYTLDRLP 303
           AF V +    +DA   V  KLLNL+RTGRLGHY LD LP
Sbjct: 357 AFHVSIESEEDDAHDKVAGKLLNLFRTGRLGHYILDNLP 395


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/89 (50%), Positives = 59/89 (66%)
 Frame = +1

Query: 34  GPKKQVPDHTQDSIVNDVRRTLFETVSSFSEDLEDKANFAELCKLHLMGLHKAFQVVPGT 213
           G K+ + DHTQD IV+  RR LFETVSSF  D++++ +  +L +L +  L + F +    
Sbjct: 283 GKKEHLTDHTQDFIVHCARRKLFETVSSFDGDVQNEVDLQKLIELQVAALTETFHLPLDL 342

Query: 214 GEDADHIVGRKLLNLYRTGRLGHYTLDRL 300
            +DA   V  KLLNLYRTGRLGHYTLD L
Sbjct: 343 EDDACSKVATKLLNLYRTGRLGHYTLDPL 371


>ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|222859331|gb|EEE96878.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = +1

Query: 10  STVSEVKMGPKKQVP-DHTQDSIVNDVRRTLFETVSSFSEDLEDKANFAELCKLHLMGLH 186
           S+ S++ M  K+Q P DHTQD +VN VRRTL E++S    +++++ +  EL ++    L 
Sbjct: 239 SSDSKLNMKRKRQYPSDHTQDFMVNRVRRTLLESISCLDGNIKNEKDLEELIEVQFTALR 298

Query: 187 KAFQVVPGTGEDADHIVGRKLLNLYRTGRLGHYTLDRLP 303
           +AF V      D+   +  KLLNLYRTGRLGHYTLD LP
Sbjct: 299 EAFLVSLEPCNDSQTKISAKLLNLYRTGRLGHYTLDPLP 337


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